Gene : Medtr1g100960 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10114 - 60S RIBOSOMAL PROTEIN L36 Description:  60S ribosomal protein L36
Genomic Order:  5630 Name:  ? Medtr1g100960
Secondary Identifier:  ? PAC:31092771
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g100960 0.5kb upstream 0.5kb upstream 2106 true chr1: 45333724-45335829 Medicago truncatula
Medtr1g100960 0.5kb upstream 0.5kb upstream 500 false chr1: 45333724-45334223 Medicago truncatula
Medtr1g100960 0.5kb downstream 0.5kb downstream 2106 true chr1: 45334224-45336329 Medicago truncatula
Medtr1g100960 0.5kb downstream 0.5kb downstream 500 false chr1: 45335830-45336329 Medicago truncatula
Medtr1g100960 1.0kb upstream 1.0kb upstream 2606 true chr1: 45333224-45335829 Medicago truncatula
Medtr1g100960 1.0kb upstream 1.0kb upstream 1000 false chr1: 45333224-45334223 Medicago truncatula
Medtr1g100960 1.0kb downstream 1.0kb downstream 2606 true chr1: 45334224-45336829 Medicago truncatula
Medtr1g100960 1.0kb downstream 1.0kb downstream 1000 false chr1: 45335830-45336829 Medicago truncatula
Medtr1g100960 2.0kb upstream 2.0kb upstream 3606 true chr1: 45332224-45335829 Medicago truncatula
Medtr1g100960 2.0kb upstream 2.0kb upstream 2000 false chr1: 45332224-45334223 Medicago truncatula
Medtr1g100960 2.0kb downstream 2.0kb downstream 3606 true chr1: 45334224-45337829 Medicago truncatula
Medtr1g100960 2.0kb downstream 2.0kb downstream 2000 false chr1: 45335830-45337829 Medicago truncatula
Medtr1g100960 5.0kb upstream 5.0kb upstream 6606 true chr1: 45329224-45335829 Medicago truncatula
Medtr1g100960 5.0kb upstream 5.0kb upstream 5000 false chr1: 45329224-45334223 Medicago truncatula
Medtr1g100960 5.0kb downstream 5.0kb downstream 6606 true chr1: 45334224-45340829 Medicago truncatula
Medtr1g100960 5.0kb downstream 5.0kb downstream 5000 false chr1: 45335830-45340829 Medicago truncatula
Medtr1g100960 10.0kb upstream 10.0kb upstream 11606 true chr1: 45324224-45335829 Medicago truncatula
Medtr1g100960 10.0kb upstream 10.0kb upstream 10000 false chr1: 45324224-45334223 Medicago truncatula
Medtr1g100960 10.0kb downstream 10.0kb downstream 11606 true chr1: 45334224-45345829 Medicago truncatula
Medtr1g100960 10.0kb downstream 10.0kb downstream 10000 false chr1: 45335830-45345829 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314053 5265 Fabidae View MSA
124066905 5270 Rosid View MSA
123747585 5271 Pentapetalae View MSA
122796759 5272 Eudicot View MSA
122049276 5273 Angiosperm View MSA
121349373 5274 Embryophyte View MSA
123424507 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.767     High  
cufflinks 30.674     High  
cufflinks 42.512     High  
cufflinks 170.625     High  
cufflinks 54.576     High  
cufflinks 478.215     High High
cufflinks 56.43     High  
cufflinks 45.232     High  
cufflinks 89.19     High  

0 Strain