Gene : Medtr1g101870 M. truncatula Mt4.0v1
Defline:  (1 of 1) PF01926//PF03143//PF03144//PF05496//PF09728 - 50S ribosome-binding GTPase (MMR_HSR1) // Elongation factor Tu C-terminal domain (GTP_EFTU_D3) // Elongation factor Tu domain 2 (GTP_EFTU_D2) // Holliday junction DNA helicase ruvB N-terminus (RuvB_N) // Myosin-like coiled-coil protein (Taxilin) Description:  elongation factor 1-alpha
Genomic Order:  5726 Name:  ? Medtr1g101870
Secondary Identifier:  ? PAC:31093656
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g101870 0.5kb upstream 0.5kb upstream 9684 true chr1: 45981185-45990868 Medicago truncatula
Medtr1g101870 0.5kb upstream 0.5kb upstream 500 false chr1: 45981185-45981684 Medicago truncatula
Medtr1g101870 0.5kb downstream 0.5kb downstream 9684 true chr1: 45981685-45991368 Medicago truncatula
Medtr1g101870 0.5kb downstream 0.5kb downstream 500 false chr1: 45990869-45991368 Medicago truncatula
Medtr1g101870 1.0kb upstream 1.0kb upstream 10184 true chr1: 45980685-45990868 Medicago truncatula
Medtr1g101870 1.0kb upstream 1.0kb upstream 1000 false chr1: 45980685-45981684 Medicago truncatula
Medtr1g101870 1.0kb downstream 1.0kb downstream 10184 true chr1: 45981685-45991868 Medicago truncatula
Medtr1g101870 1.0kb downstream 1.0kb downstream 1000 false chr1: 45990869-45991868 Medicago truncatula
Medtr1g101870 2.0kb upstream 2.0kb upstream 11184 true chr1: 45979685-45990868 Medicago truncatula
Medtr1g101870 2.0kb upstream 2.0kb upstream 2000 false chr1: 45979685-45981684 Medicago truncatula
Medtr1g101870 2.0kb downstream 2.0kb downstream 11184 true chr1: 45981685-45992868 Medicago truncatula
Medtr1g101870 2.0kb downstream 2.0kb downstream 2000 false chr1: 45990869-45992868 Medicago truncatula
Medtr1g101870 5.0kb upstream 5.0kb upstream 14184 true chr1: 45976685-45990868 Medicago truncatula
Medtr1g101870 5.0kb upstream 5.0kb upstream 5000 false chr1: 45976685-45981684 Medicago truncatula
Medtr1g101870 5.0kb downstream 5.0kb downstream 14184 true chr1: 45981685-45995868 Medicago truncatula
Medtr1g101870 5.0kb downstream 5.0kb downstream 5000 false chr1: 45990869-45995868 Medicago truncatula
Medtr1g101870 10.0kb upstream 10.0kb upstream 19184 true chr1: 45971685-45990868 Medicago truncatula
Medtr1g101870 10.0kb upstream 10.0kb upstream 10000 false chr1: 45971685-45981684 Medicago truncatula
Medtr1g101870 10.0kb downstream 10.0kb downstream 19184 true chr1: 45981685-46000868 Medicago truncatula
Medtr1g101870 10.0kb downstream 10.0kb downstream 10000 false chr1: 45990869-46000868 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121649938 5273 Angiosperm View MSA
122289552 5265 Fabidae View MSA
124029545 5270 Rosid View MSA
123603221 5271 Pentapetalae View MSA
122637894 5272 Eudicot View MSA
120922041 5274 Embryophyte View MSA
122962690 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.095        
cufflinks 0.157        
cufflinks 0.225        
cufflinks 0.028     Low Low
cufflinks 0.31       High
cufflinks 0.013     Low Low
cufflinks 0.143        
cufflinks 0.139        
cufflinks 0.13        

0 Strain