Gene : Medtr1g101840 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10869:SF80 - IRON ION BINDING / OXIDOREDUCTASE Description:  2OG-Fe(II) oxygenase family protein
Genomic Order:  5723 Name:  ? Medtr1g101840
Secondary Identifier:  ? PAC:31100791
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g101840 0.5kb upstream 0.5kb upstream 1706 true chr1: 45974935-45976640 Medicago truncatula
Medtr1g101840 0.5kb upstream 0.5kb upstream 500 false chr1: 45976141-45976640 Medicago truncatula
Medtr1g101840 0.5kb downstream 0.5kb downstream 1706 true chr1: 45974435-45976140 Medicago truncatula
Medtr1g101840 0.5kb downstream 0.5kb downstream 500 false chr1: 45974435-45974934 Medicago truncatula
Medtr1g101840 1.0kb upstream 1.0kb upstream 2206 true chr1: 45974935-45977140 Medicago truncatula
Medtr1g101840 1.0kb upstream 1.0kb upstream 1000 false chr1: 45976141-45977140 Medicago truncatula
Medtr1g101840 1.0kb downstream 1.0kb downstream 2206 true chr1: 45973935-45976140 Medicago truncatula
Medtr1g101840 1.0kb downstream 1.0kb downstream 1000 false chr1: 45973935-45974934 Medicago truncatula
Medtr1g101840 2.0kb upstream 2.0kb upstream 3206 true chr1: 45974935-45978140 Medicago truncatula
Medtr1g101840 2.0kb upstream 2.0kb upstream 2000 false chr1: 45976141-45978140 Medicago truncatula
Medtr1g101840 2.0kb downstream 2.0kb downstream 3206 true chr1: 45972935-45976140 Medicago truncatula
Medtr1g101840 2.0kb downstream 2.0kb downstream 2000 false chr1: 45972935-45974934 Medicago truncatula
Medtr1g101840 5.0kb upstream 5.0kb upstream 6206 true chr1: 45974935-45981140 Medicago truncatula
Medtr1g101840 5.0kb upstream 5.0kb upstream 5000 false chr1: 45976141-45981140 Medicago truncatula
Medtr1g101840 5.0kb downstream 5.0kb downstream 6206 true chr1: 45969935-45976140 Medicago truncatula
Medtr1g101840 5.0kb downstream 5.0kb downstream 5000 false chr1: 45969935-45974934 Medicago truncatula
Medtr1g101840 10.0kb upstream 10.0kb upstream 11206 true chr1: 45974935-45986140 Medicago truncatula
Medtr1g101840 10.0kb upstream 10.0kb upstream 10000 false chr1: 45976141-45986140 Medicago truncatula
Medtr1g101840 10.0kb downstream 10.0kb downstream 11206 true chr1: 45964935-45976140 Medicago truncatula
Medtr1g101840 10.0kb downstream 10.0kb downstream 10000 false chr1: 45964935-45974934 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122257393 5265 Fabidae Singleton cluster - no MSA
123998955 5270 Rosid Singleton cluster - no MSA
123744389 5271 Pentapetalae View MSA
122789479 5272 Eudicot View MSA
122042956 5273 Angiosperm View MSA
121350444 5274 Embryophyte View MSA
123425265 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.845        
cufflinks 12.314     High  
cufflinks 19.693     High High
cufflinks 5.693        
cufflinks 20.462     High High
cufflinks 3.694       Low
cufflinks 9.452        
cufflinks 17.277     High  
cufflinks 4.705       Low

0 Strain