Gene : Medtr1g102870 M. truncatula Mt4.0v1
Defline:  (1 of 2) 1.13.11.53 - Acireductone dioxygenase (Ni(2+)-requiring) / E-2 Description:  1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase
Genomic Order:  5803 Name:  ? Medtr1g102870
Secondary Identifier:  ? PAC:31093304
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4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-4361 Medicago truncatula pathologic  
Mtruncatula PWY-5389 Medicago truncatula pathologic  
Mtruncatula PWY-7270 Medicago truncatula pathologic  
Mtruncatula PWY-7528 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g102870 0.5kb upstream 0.5kb upstream 3683 true chr1: 46491467-46495149 Medicago truncatula
Medtr1g102870 0.5kb upstream 0.5kb upstream 500 false chr1: 46494650-46495149 Medicago truncatula
Medtr1g102870 0.5kb downstream 0.5kb downstream 3683 true chr1: 46490967-46494649 Medicago truncatula
Medtr1g102870 0.5kb downstream 0.5kb downstream 500 false chr1: 46490967-46491466 Medicago truncatula
Medtr1g102870 1.0kb upstream 1.0kb upstream 4183 true chr1: 46491467-46495649 Medicago truncatula
Medtr1g102870 1.0kb upstream 1.0kb upstream 1000 false chr1: 46494650-46495649 Medicago truncatula
Medtr1g102870 1.0kb downstream 1.0kb downstream 4183 true chr1: 46490467-46494649 Medicago truncatula
Medtr1g102870 1.0kb downstream 1.0kb downstream 1000 false chr1: 46490467-46491466 Medicago truncatula
Medtr1g102870 2.0kb upstream 2.0kb upstream 5183 true chr1: 46491467-46496649 Medicago truncatula
Medtr1g102870 2.0kb upstream 2.0kb upstream 2000 false chr1: 46494650-46496649 Medicago truncatula
Medtr1g102870 2.0kb downstream 2.0kb downstream 5183 true chr1: 46489467-46494649 Medicago truncatula
Medtr1g102870 2.0kb downstream 2.0kb downstream 2000 false chr1: 46489467-46491466 Medicago truncatula
Medtr1g102870 5.0kb upstream 5.0kb upstream 8183 true chr1: 46491467-46499649 Medicago truncatula
Medtr1g102870 5.0kb upstream 5.0kb upstream 5000 false chr1: 46494650-46499649 Medicago truncatula
Medtr1g102870 5.0kb downstream 5.0kb downstream 8183 true chr1: 46486467-46494649 Medicago truncatula
Medtr1g102870 5.0kb downstream 5.0kb downstream 5000 false chr1: 46486467-46491466 Medicago truncatula
Medtr1g102870 10.0kb upstream 10.0kb upstream 13183 true chr1: 46491467-46504649 Medicago truncatula
Medtr1g102870 10.0kb upstream 10.0kb upstream 10000 false chr1: 46494650-46504649 Medicago truncatula
Medtr1g102870 10.0kb downstream 10.0kb downstream 13183 true chr1: 46481467-46494649 Medicago truncatula
Medtr1g102870 10.0kb downstream 10.0kb downstream 10000 false chr1: 46481467-46491466 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312275 5265 Fabidae View MSA
124070123 5270 Rosid View MSA
123741202 5271 Pentapetalae View MSA
122793339 5272 Eudicot View MSA
122046510 5273 Angiosperm View MSA
121343851 5274 Embryophyte View MSA
123424670 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 43.658     High High
cufflinks 25.507     High  
cufflinks 36.499     High  
cufflinks 28.393     High  
cufflinks 30.548     High  
cufflinks 18.758     High Low
cufflinks 29.892     High  
cufflinks 26.644     High  
cufflinks 27.623     High  

0 Strain