Gene : Medtr1g102900 M. truncatula Mt4.0v1
Defline:  (1 of 14) PF06200//PF09425 - tify domain (tify) // Divergent CCT motif (CCT_2) Description:  divergent CCT motif protein
Genomic Order:  5806 Name:  ? Medtr1g102900
Secondary Identifier:  ? PAC:31096251
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g102900 0.5kb upstream 0.5kb upstream 7158 true chr1: 46507169-46514326 Medicago truncatula
Medtr1g102900 0.5kb upstream 0.5kb upstream 500 false chr1: 46513827-46514326 Medicago truncatula
Medtr1g102900 0.5kb downstream 0.5kb downstream 7158 true chr1: 46506669-46513826 Medicago truncatula
Medtr1g102900 0.5kb downstream 0.5kb downstream 500 false chr1: 46506669-46507168 Medicago truncatula
Medtr1g102900 1.0kb upstream 1.0kb upstream 7658 true chr1: 46507169-46514826 Medicago truncatula
Medtr1g102900 1.0kb upstream 1.0kb upstream 1000 false chr1: 46513827-46514826 Medicago truncatula
Medtr1g102900 1.0kb downstream 1.0kb downstream 7658 true chr1: 46506169-46513826 Medicago truncatula
Medtr1g102900 1.0kb downstream 1.0kb downstream 1000 false chr1: 46506169-46507168 Medicago truncatula
Medtr1g102900 2.0kb upstream 2.0kb upstream 8658 true chr1: 46507169-46515826 Medicago truncatula
Medtr1g102900 2.0kb upstream 2.0kb upstream 2000 false chr1: 46513827-46515826 Medicago truncatula
Medtr1g102900 2.0kb downstream 2.0kb downstream 8658 true chr1: 46505169-46513826 Medicago truncatula
Medtr1g102900 2.0kb downstream 2.0kb downstream 2000 false chr1: 46505169-46507168 Medicago truncatula
Medtr1g102900 5.0kb upstream 5.0kb upstream 11658 true chr1: 46507169-46518826 Medicago truncatula
Medtr1g102900 5.0kb upstream 5.0kb upstream 5000 false chr1: 46513827-46518826 Medicago truncatula
Medtr1g102900 5.0kb downstream 5.0kb downstream 11658 true chr1: 46502169-46513826 Medicago truncatula
Medtr1g102900 5.0kb downstream 5.0kb downstream 5000 false chr1: 46502169-46507168 Medicago truncatula
Medtr1g102900 10.0kb upstream 10.0kb upstream 16658 true chr1: 46507169-46523826 Medicago truncatula
Medtr1g102900 10.0kb upstream 10.0kb upstream 10000 false chr1: 46513827-46523826 Medicago truncatula
Medtr1g102900 10.0kb downstream 10.0kb downstream 16658 true chr1: 46497169-46513826 Medicago truncatula
Medtr1g102900 10.0kb downstream 10.0kb downstream 10000 false chr1: 46497169-46507168 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300541 5265 Fabidae View MSA
124071929 5270 Rosid View MSA
123743531 5271 Pentapetalae View MSA
122792632 5272 Eudicot View MSA
122044568 5273 Angiosperm View MSA
121310313 5274 Embryophyte View MSA
123347830 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.049     Low Low
cufflinks 0.11        
cufflinks 0.106        
cufflinks 0.084        
cufflinks 0.164       High
cufflinks 0.052     Low Low
cufflinks 0.07     Low  
cufflinks 0.09        
cufflinks 0.107        

0 Strain