Gene : Medtr1g104610 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12725//PTHR12725:SF81 - HALOACID DEHALOGENASE-LIKE HYDROLASE Description:  haloacid dehalogenase-like hydrolase
Genomic Order:  5890 Name:  ? Medtr1g104610
Secondary Identifier:  ? PAC:31092462
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-7204 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g104610 0.5kb upstream 0.5kb upstream 2729 true chr1: 47119091-47121819 Medicago truncatula
Medtr1g104610 0.5kb upstream 0.5kb upstream 500 false chr1: 47119091-47119590 Medicago truncatula
Medtr1g104610 0.5kb downstream 0.5kb downstream 2729 true chr1: 47119591-47122319 Medicago truncatula
Medtr1g104610 0.5kb downstream 0.5kb downstream 500 false chr1: 47121820-47122319 Medicago truncatula
Medtr1g104610 1.0kb upstream 1.0kb upstream 3229 true chr1: 47118591-47121819 Medicago truncatula
Medtr1g104610 1.0kb upstream 1.0kb upstream 1000 false chr1: 47118591-47119590 Medicago truncatula
Medtr1g104610 1.0kb downstream 1.0kb downstream 3229 true chr1: 47119591-47122819 Medicago truncatula
Medtr1g104610 1.0kb downstream 1.0kb downstream 1000 false chr1: 47121820-47122819 Medicago truncatula
Medtr1g104610 2.0kb upstream 2.0kb upstream 4229 true chr1: 47117591-47121819 Medicago truncatula
Medtr1g104610 2.0kb upstream 2.0kb upstream 2000 false chr1: 47117591-47119590 Medicago truncatula
Medtr1g104610 2.0kb downstream 2.0kb downstream 4229 true chr1: 47119591-47123819 Medicago truncatula
Medtr1g104610 2.0kb downstream 2.0kb downstream 2000 false chr1: 47121820-47123819 Medicago truncatula
Medtr1g104610 5.0kb upstream 5.0kb upstream 7229 true chr1: 47114591-47121819 Medicago truncatula
Medtr1g104610 5.0kb upstream 5.0kb upstream 5000 false chr1: 47114591-47119590 Medicago truncatula
Medtr1g104610 5.0kb downstream 5.0kb downstream 7229 true chr1: 47119591-47126819 Medicago truncatula
Medtr1g104610 5.0kb downstream 5.0kb downstream 5000 false chr1: 47121820-47126819 Medicago truncatula
Medtr1g104610 10.0kb upstream 10.0kb upstream 12229 true chr1: 47109591-47121819 Medicago truncatula
Medtr1g104610 10.0kb upstream 10.0kb upstream 10000 false chr1: 47109591-47119590 Medicago truncatula
Medtr1g104610 10.0kb downstream 10.0kb downstream 12229 true chr1: 47119591-47131819 Medicago truncatula
Medtr1g104610 10.0kb downstream 10.0kb downstream 10000 false chr1: 47121820-47131819 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309216 5265 Fabidae View MSA
124062962 5270 Rosid View MSA
123740146 5271 Pentapetalae View MSA
122790968 5272 Eudicot View MSA
122048898 5273 Angiosperm View MSA
121311158 5274 Embryophyte View MSA
123426890 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 272.049     High High
cufflinks 97.855     High Low
cufflinks 240.994     High  
cufflinks 138.614     High  
cufflinks 75.096     High Low
cufflinks 140.864     High  
cufflinks 180.337     High  
cufflinks 196.081     High  
cufflinks 238.274     High  

0 Strain