Gene : Medtr1g105480 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10617:SF115 - THIAMINE THIAZOLE SYNTHASE Description:  thiazole biosynthetic enzyme
Genomic Order:  5946 Name:  ? Medtr1g105480
Secondary Identifier:  ? PAC:31099420
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g105480 0.5kb upstream 0.5kb upstream 2793 true chr1: 47480089-47482881 Medicago truncatula
Medtr1g105480 0.5kb upstream 0.5kb upstream 500 false chr1: 47482382-47482881 Medicago truncatula
Medtr1g105480 0.5kb downstream 0.5kb downstream 2793 true chr1: 47479589-47482381 Medicago truncatula
Medtr1g105480 0.5kb downstream 0.5kb downstream 500 false chr1: 47479589-47480088 Medicago truncatula
Medtr1g105480 1.0kb upstream 1.0kb upstream 3293 true chr1: 47480089-47483381 Medicago truncatula
Medtr1g105480 1.0kb upstream 1.0kb upstream 1000 false chr1: 47482382-47483381 Medicago truncatula
Medtr1g105480 1.0kb downstream 1.0kb downstream 3293 true chr1: 47479089-47482381 Medicago truncatula
Medtr1g105480 1.0kb downstream 1.0kb downstream 1000 false chr1: 47479089-47480088 Medicago truncatula
Medtr1g105480 2.0kb upstream 2.0kb upstream 4293 true chr1: 47480089-47484381 Medicago truncatula
Medtr1g105480 2.0kb upstream 2.0kb upstream 2000 false chr1: 47482382-47484381 Medicago truncatula
Medtr1g105480 2.0kb downstream 2.0kb downstream 4293 true chr1: 47478089-47482381 Medicago truncatula
Medtr1g105480 2.0kb downstream 2.0kb downstream 2000 false chr1: 47478089-47480088 Medicago truncatula
Medtr1g105480 5.0kb upstream 5.0kb upstream 7293 true chr1: 47480089-47487381 Medicago truncatula
Medtr1g105480 5.0kb upstream 5.0kb upstream 5000 false chr1: 47482382-47487381 Medicago truncatula
Medtr1g105480 5.0kb downstream 5.0kb downstream 7293 true chr1: 47475089-47482381 Medicago truncatula
Medtr1g105480 5.0kb downstream 5.0kb downstream 5000 false chr1: 47475089-47480088 Medicago truncatula
Medtr1g105480 10.0kb upstream 10.0kb upstream 12293 true chr1: 47480089-47492381 Medicago truncatula
Medtr1g105480 10.0kb upstream 10.0kb upstream 10000 false chr1: 47482382-47492381 Medicago truncatula
Medtr1g105480 10.0kb downstream 10.0kb downstream 12293 true chr1: 47470089-47482381 Medicago truncatula
Medtr1g105480 10.0kb downstream 10.0kb downstream 10000 false chr1: 47470089-47480088 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309348 5265 Fabidae View MSA
124071218 5270 Rosid View MSA
123744490 5271 Pentapetalae View MSA
122793615 5272 Eudicot View MSA
122045282 5273 Angiosperm View MSA
121346380 5274 Embryophyte View MSA
123423990 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.616     High  
cufflinks 77.299     High  
cufflinks 125.497     High  
cufflinks 7.884        
cufflinks 369.261     High High
cufflinks 1.414       Low
cufflinks 3.28       Low
cufflinks 86.16     High  
cufflinks 16.449     High  

0 Strain