Gene : Medtr1g095620 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR31394:SF1 - TRANSMEMBRANE PROTEIN 199 Description:  endoplasmic reticulum-based factor for assembly of V-ATPase
Genomic Order:  5331 Name:  ? Medtr1g095620
Secondary Identifier:  ? PAC:31099985
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g095620 0.5kb upstream 0.5kb upstream 4025 true chr1: 43026516-43030540 Medicago truncatula
Medtr1g095620 0.5kb upstream 0.5kb upstream 500 false chr1: 43030041-43030540 Medicago truncatula
Medtr1g095620 0.5kb downstream 0.5kb downstream 4025 true chr1: 43026016-43030040 Medicago truncatula
Medtr1g095620 0.5kb downstream 0.5kb downstream 500 false chr1: 43026016-43026515 Medicago truncatula
Medtr1g095620 1.0kb upstream 1.0kb upstream 4525 true chr1: 43026516-43031040 Medicago truncatula
Medtr1g095620 1.0kb upstream 1.0kb upstream 1000 false chr1: 43030041-43031040 Medicago truncatula
Medtr1g095620 1.0kb downstream 1.0kb downstream 4525 true chr1: 43025516-43030040 Medicago truncatula
Medtr1g095620 1.0kb downstream 1.0kb downstream 1000 false chr1: 43025516-43026515 Medicago truncatula
Medtr1g095620 2.0kb upstream 2.0kb upstream 5525 true chr1: 43026516-43032040 Medicago truncatula
Medtr1g095620 2.0kb upstream 2.0kb upstream 2000 false chr1: 43030041-43032040 Medicago truncatula
Medtr1g095620 2.0kb downstream 2.0kb downstream 5525 true chr1: 43024516-43030040 Medicago truncatula
Medtr1g095620 2.0kb downstream 2.0kb downstream 2000 false chr1: 43024516-43026515 Medicago truncatula
Medtr1g095620 5.0kb upstream 5.0kb upstream 8525 true chr1: 43026516-43035040 Medicago truncatula
Medtr1g095620 5.0kb upstream 5.0kb upstream 5000 false chr1: 43030041-43035040 Medicago truncatula
Medtr1g095620 5.0kb downstream 5.0kb downstream 8525 true chr1: 43021516-43030040 Medicago truncatula
Medtr1g095620 5.0kb downstream 5.0kb downstream 5000 false chr1: 43021516-43026515 Medicago truncatula
Medtr1g095620 10.0kb upstream 10.0kb upstream 13525 true chr1: 43026516-43040040 Medicago truncatula
Medtr1g095620 10.0kb upstream 10.0kb upstream 10000 false chr1: 43030041-43040040 Medicago truncatula
Medtr1g095620 10.0kb downstream 10.0kb downstream 13525 true chr1: 43016516-43030040 Medicago truncatula
Medtr1g095620 10.0kb downstream 10.0kb downstream 10000 false chr1: 43016516-43026515 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308398 5265 Fabidae View MSA
124060420 5270 Rosid View MSA
123736376 5271 Pentapetalae View MSA
122786410 5272 Eudicot View MSA
122047904 5273 Angiosperm View MSA
121346393 5274 Embryophyte View MSA
123426086 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.871        
cufflinks 6.49        
cufflinks 6.835        
cufflinks 4.866        
cufflinks 6.504        
cufflinks 2.251       Low
cufflinks 7.678        
cufflinks 5.743        
cufflinks 8.587        

0 Strain