Gene : Medtr1g095490 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR13377 - PLACENTAL PROTEIN 6 Description:  transmembrane protein, putative
Genomic Order:  5321 Name:  ? Medtr1g095490
Secondary Identifier:  ? PAC:31097367
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g095490 0.5kb upstream 0.5kb upstream 3865 true chr1: 42949167-42953031 Medicago truncatula
Medtr1g095490 0.5kb upstream 0.5kb upstream 500 false chr1: 42949167-42949666 Medicago truncatula
Medtr1g095490 0.5kb downstream 0.5kb downstream 3865 true chr1: 42949667-42953531 Medicago truncatula
Medtr1g095490 0.5kb downstream 0.5kb downstream 500 false chr1: 42953032-42953531 Medicago truncatula
Medtr1g095490 1.0kb upstream 1.0kb upstream 4365 true chr1: 42948667-42953031 Medicago truncatula
Medtr1g095490 1.0kb upstream 1.0kb upstream 1000 false chr1: 42948667-42949666 Medicago truncatula
Medtr1g095490 1.0kb downstream 1.0kb downstream 4365 true chr1: 42949667-42954031 Medicago truncatula
Medtr1g095490 1.0kb downstream 1.0kb downstream 1000 false chr1: 42953032-42954031 Medicago truncatula
Medtr1g095490 2.0kb upstream 2.0kb upstream 5365 true chr1: 42947667-42953031 Medicago truncatula
Medtr1g095490 2.0kb upstream 2.0kb upstream 2000 false chr1: 42947667-42949666 Medicago truncatula
Medtr1g095490 2.0kb downstream 2.0kb downstream 5365 true chr1: 42949667-42955031 Medicago truncatula
Medtr1g095490 2.0kb downstream 2.0kb downstream 2000 false chr1: 42953032-42955031 Medicago truncatula
Medtr1g095490 5.0kb upstream 5.0kb upstream 8365 true chr1: 42944667-42953031 Medicago truncatula
Medtr1g095490 5.0kb upstream 5.0kb upstream 5000 false chr1: 42944667-42949666 Medicago truncatula
Medtr1g095490 5.0kb downstream 5.0kb downstream 8365 true chr1: 42949667-42958031 Medicago truncatula
Medtr1g095490 5.0kb downstream 5.0kb downstream 5000 false chr1: 42953032-42958031 Medicago truncatula
Medtr1g095490 10.0kb upstream 10.0kb upstream 13365 true chr1: 42939667-42953031 Medicago truncatula
Medtr1g095490 10.0kb upstream 10.0kb upstream 10000 false chr1: 42939667-42949666 Medicago truncatula
Medtr1g095490 10.0kb downstream 10.0kb downstream 13365 true chr1: 42949667-42963031 Medicago truncatula
Medtr1g095490 10.0kb downstream 10.0kb downstream 10000 false chr1: 42953032-42963031 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311918 5265 Fabidae View MSA
124061195 5270 Rosid View MSA
123748664 5271 Pentapetalae View MSA
122792028 5272 Eudicot View MSA
122043069 5273 Angiosperm View MSA
121350097 5274 Embryophyte View MSA
123424498 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.082       Low
cufflinks 4.033        
cufflinks 3.324        
cufflinks 4.049        
cufflinks 4.774        
cufflinks 1.604       Low
cufflinks 3.251        
cufflinks 2.954        
cufflinks 5.84       High

0 Strain