Gene : Medtr1g096580 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR19241:SF225 - ABC TRANSPORTER G FAMILY MEMBER 25 Description:  white-brown-complex ABC transporter family protein
Genomic Order:  5387 Name:  ? Medtr1g096580
Secondary Identifier:  ? PAC:31094678
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g096580 0.5kb upstream 0.5kb upstream 8028 true chr1: 43517342-43525369 Medicago truncatula
Medtr1g096580 0.5kb upstream 0.5kb upstream 500 false chr1: 43517342-43517841 Medicago truncatula
Medtr1g096580 0.5kb downstream 0.5kb downstream 8028 true chr1: 43517842-43525869 Medicago truncatula
Medtr1g096580 0.5kb downstream 0.5kb downstream 500 false chr1: 43525370-43525869 Medicago truncatula
Medtr1g096580 1.0kb upstream 1.0kb upstream 8528 true chr1: 43516842-43525369 Medicago truncatula
Medtr1g096580 1.0kb upstream 1.0kb upstream 1000 false chr1: 43516842-43517841 Medicago truncatula
Medtr1g096580 1.0kb downstream 1.0kb downstream 8528 true chr1: 43517842-43526369 Medicago truncatula
Medtr1g096580 1.0kb downstream 1.0kb downstream 1000 false chr1: 43525370-43526369 Medicago truncatula
Medtr1g096580 2.0kb upstream 2.0kb upstream 9528 true chr1: 43515842-43525369 Medicago truncatula
Medtr1g096580 2.0kb upstream 2.0kb upstream 2000 false chr1: 43515842-43517841 Medicago truncatula
Medtr1g096580 2.0kb downstream 2.0kb downstream 9528 true chr1: 43517842-43527369 Medicago truncatula
Medtr1g096580 2.0kb downstream 2.0kb downstream 2000 false chr1: 43525370-43527369 Medicago truncatula
Medtr1g096580 5.0kb upstream 5.0kb upstream 12528 true chr1: 43512842-43525369 Medicago truncatula
Medtr1g096580 5.0kb upstream 5.0kb upstream 5000 false chr1: 43512842-43517841 Medicago truncatula
Medtr1g096580 5.0kb downstream 5.0kb downstream 12528 true chr1: 43517842-43530369 Medicago truncatula
Medtr1g096580 5.0kb downstream 5.0kb downstream 5000 false chr1: 43525370-43530369 Medicago truncatula
Medtr1g096580 10.0kb upstream 10.0kb upstream 17528 true chr1: 43507842-43525369 Medicago truncatula
Medtr1g096580 10.0kb upstream 10.0kb upstream 10000 false chr1: 43507842-43517841 Medicago truncatula
Medtr1g096580 10.0kb downstream 10.0kb downstream 17528 true chr1: 43517842-43535369 Medicago truncatula
Medtr1g096580 10.0kb downstream 10.0kb downstream 10000 false chr1: 43525370-43535369 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299552 5265 Fabidae View MSA
124060664 5270 Rosid View MSA
123738017 5271 Pentapetalae View MSA
122789288 5272 Eudicot View MSA
122050234 5273 Angiosperm View MSA
123428903 5275 Viridiplantae View MSA
121348566 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.818        
cufflinks 1.208        
cufflinks 0.806        
cufflinks 2.021        
cufflinks 0.79        
cufflinks 0.712       Low
cufflinks 2.727       High
cufflinks 0.858        
cufflinks 3.473       High

0 Strain