Gene : Medtr1g096460 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR21349:SF2 - 50S RIBOSOMAL PROTEIN L21, CHLOROPLASTIC Description:  50S ribosomal protein L21
Genomic Order:  5383 Name:  ? Medtr1g096460
Secondary Identifier:  ? PAC:31096003
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g096460 0.5kb upstream 0.5kb upstream 3009 true chr1: 43449886-43452894 Medicago truncatula
Medtr1g096460 0.5kb upstream 0.5kb upstream 500 false chr1: 43452395-43452894 Medicago truncatula
Medtr1g096460 0.5kb downstream 0.5kb downstream 3009 true chr1: 43449386-43452394 Medicago truncatula
Medtr1g096460 0.5kb downstream 0.5kb downstream 500 false chr1: 43449386-43449885 Medicago truncatula
Medtr1g096460 1.0kb upstream 1.0kb upstream 3509 true chr1: 43449886-43453394 Medicago truncatula
Medtr1g096460 1.0kb upstream 1.0kb upstream 1000 false chr1: 43452395-43453394 Medicago truncatula
Medtr1g096460 1.0kb downstream 1.0kb downstream 3509 true chr1: 43448886-43452394 Medicago truncatula
Medtr1g096460 1.0kb downstream 1.0kb downstream 1000 false chr1: 43448886-43449885 Medicago truncatula
Medtr1g096460 2.0kb upstream 2.0kb upstream 4509 true chr1: 43449886-43454394 Medicago truncatula
Medtr1g096460 2.0kb upstream 2.0kb upstream 2000 false chr1: 43452395-43454394 Medicago truncatula
Medtr1g096460 2.0kb downstream 2.0kb downstream 4509 true chr1: 43447886-43452394 Medicago truncatula
Medtr1g096460 2.0kb downstream 2.0kb downstream 2000 false chr1: 43447886-43449885 Medicago truncatula
Medtr1g096460 5.0kb upstream 5.0kb upstream 7509 true chr1: 43449886-43457394 Medicago truncatula
Medtr1g096460 5.0kb upstream 5.0kb upstream 5000 false chr1: 43452395-43457394 Medicago truncatula
Medtr1g096460 5.0kb downstream 5.0kb downstream 7509 true chr1: 43444886-43452394 Medicago truncatula
Medtr1g096460 5.0kb downstream 5.0kb downstream 5000 false chr1: 43444886-43449885 Medicago truncatula
Medtr1g096460 10.0kb upstream 10.0kb upstream 12509 true chr1: 43449886-43462394 Medicago truncatula
Medtr1g096460 10.0kb upstream 10.0kb upstream 10000 false chr1: 43452395-43462394 Medicago truncatula
Medtr1g096460 10.0kb downstream 10.0kb downstream 12509 true chr1: 43439886-43452394 Medicago truncatula
Medtr1g096460 10.0kb downstream 10.0kb downstream 10000 false chr1: 43439886-43449885 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305407 5265 Fabidae View MSA
124063218 5270 Rosid View MSA
123736707 5271 Pentapetalae View MSA
122790163 5272 Eudicot View MSA
122044940 5273 Angiosperm View MSA
121350514 5274 Embryophyte View MSA
123424430 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.539     High Low
cufflinks 127.953     High  
cufflinks 150.277     High High
cufflinks 38.488     High  
cufflinks 120.503     High  
cufflinks 23.606     High  
cufflinks 19.566     High  
cufflinks 153.829     High High
cufflinks 14.003     High Low

0 Strain