Gene : Medtr1g098390 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR22883:SF41 - PROTEIN S-ACYLTRANSFERASE 8 Description:  DHHC type zinc finger protein
Genomic Order:  5488 Name:  ? Medtr1g098390
Secondary Identifier:  ? PAC:31100405
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g098390 0.5kb upstream 0.5kb upstream 4917 true chr1: 44293752-44298668 Medicago truncatula
Medtr1g098390 0.5kb upstream 0.5kb upstream 500 false chr1: 44293752-44294251 Medicago truncatula
Medtr1g098390 0.5kb downstream 0.5kb downstream 4917 true chr1: 44294252-44299168 Medicago truncatula
Medtr1g098390 0.5kb downstream 0.5kb downstream 500 false chr1: 44298669-44299168 Medicago truncatula
Medtr1g098390 1.0kb upstream 1.0kb upstream 5417 true chr1: 44293252-44298668 Medicago truncatula
Medtr1g098390 1.0kb upstream 1.0kb upstream 1000 false chr1: 44293252-44294251 Medicago truncatula
Medtr1g098390 1.0kb downstream 1.0kb downstream 5417 true chr1: 44294252-44299668 Medicago truncatula
Medtr1g098390 1.0kb downstream 1.0kb downstream 1000 false chr1: 44298669-44299668 Medicago truncatula
Medtr1g098390 2.0kb upstream 2.0kb upstream 6417 true chr1: 44292252-44298668 Medicago truncatula
Medtr1g098390 2.0kb upstream 2.0kb upstream 2000 false chr1: 44292252-44294251 Medicago truncatula
Medtr1g098390 2.0kb downstream 2.0kb downstream 6417 true chr1: 44294252-44300668 Medicago truncatula
Medtr1g098390 2.0kb downstream 2.0kb downstream 2000 false chr1: 44298669-44300668 Medicago truncatula
Medtr1g098390 5.0kb upstream 5.0kb upstream 9417 true chr1: 44289252-44298668 Medicago truncatula
Medtr1g098390 5.0kb upstream 5.0kb upstream 5000 false chr1: 44289252-44294251 Medicago truncatula
Medtr1g098390 5.0kb downstream 5.0kb downstream 9417 true chr1: 44294252-44303668 Medicago truncatula
Medtr1g098390 5.0kb downstream 5.0kb downstream 5000 false chr1: 44298669-44303668 Medicago truncatula
Medtr1g098390 10.0kb upstream 10.0kb upstream 14417 true chr1: 44284252-44298668 Medicago truncatula
Medtr1g098390 10.0kb upstream 10.0kb upstream 10000 false chr1: 44284252-44294251 Medicago truncatula
Medtr1g098390 10.0kb downstream 10.0kb downstream 14417 true chr1: 44294252-44308668 Medicago truncatula
Medtr1g098390 10.0kb downstream 10.0kb downstream 10000 false chr1: 44298669-44308668 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297603 5265 Fabidae View MSA
124069306 5270 Rosid View MSA
123750113 5271 Pentapetalae View MSA
122794086 5272 Eudicot View MSA
122051148 5273 Angiosperm View MSA
123428988 5275 Viridiplantae View MSA
121312316 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.675       Low
cufflinks 1.293        
cufflinks 1.843        
cufflinks 2.202        
cufflinks 1.586        
cufflinks 1.409        
cufflinks 3.036       High
cufflinks 1.244        
cufflinks 2.553       High

0 Strain