Gene : Medtr1g098280 M. truncatula Mt4.0v1
Description:  light-harvesting complex I chlorophyll A/B-binding protein Genomic Order:  5481
Name:  ? Medtr1g098280 Secondary Identifier:  ? PAC:31093659
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g098280 0.5kb upstream 0.5kb upstream 2798 true chr1: 44235232-44238029 Medicago truncatula
Medtr1g098280 0.5kb upstream 0.5kb upstream 500 false chr1: 44235232-44235731 Medicago truncatula
Medtr1g098280 0.5kb downstream 0.5kb downstream 2798 true chr1: 44235732-44238529 Medicago truncatula
Medtr1g098280 0.5kb downstream 0.5kb downstream 500 false chr1: 44238030-44238529 Medicago truncatula
Medtr1g098280 1.0kb upstream 1.0kb upstream 3298 true chr1: 44234732-44238029 Medicago truncatula
Medtr1g098280 1.0kb upstream 1.0kb upstream 1000 false chr1: 44234732-44235731 Medicago truncatula
Medtr1g098280 1.0kb downstream 1.0kb downstream 3298 true chr1: 44235732-44239029 Medicago truncatula
Medtr1g098280 1.0kb downstream 1.0kb downstream 1000 false chr1: 44238030-44239029 Medicago truncatula
Medtr1g098280 2.0kb upstream 2.0kb upstream 4298 true chr1: 44233732-44238029 Medicago truncatula
Medtr1g098280 2.0kb upstream 2.0kb upstream 2000 false chr1: 44233732-44235731 Medicago truncatula
Medtr1g098280 2.0kb downstream 2.0kb downstream 4298 true chr1: 44235732-44240029 Medicago truncatula
Medtr1g098280 2.0kb downstream 2.0kb downstream 2000 false chr1: 44238030-44240029 Medicago truncatula
Medtr1g098280 5.0kb upstream 5.0kb upstream 7298 true chr1: 44230732-44238029 Medicago truncatula
Medtr1g098280 5.0kb upstream 5.0kb upstream 5000 false chr1: 44230732-44235731 Medicago truncatula
Medtr1g098280 5.0kb downstream 5.0kb downstream 7298 true chr1: 44235732-44243029 Medicago truncatula
Medtr1g098280 5.0kb downstream 5.0kb downstream 5000 false chr1: 44238030-44243029 Medicago truncatula
Medtr1g098280 10.0kb upstream 10.0kb upstream 12298 true chr1: 44225732-44238029 Medicago truncatula
Medtr1g098280 10.0kb upstream 10.0kb upstream 10000 false chr1: 44225732-44235731 Medicago truncatula
Medtr1g098280 10.0kb downstream 10.0kb downstream 12298 true chr1: 44235732-44248029 Medicago truncatula
Medtr1g098280 10.0kb downstream 10.0kb downstream 10000 false chr1: 44238030-44248029 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310555 5265 Fabidae View MSA
124063800 5270 Rosid View MSA
123736472 5271 Pentapetalae View MSA
122789298 5272 Eudicot View MSA
122046872 5273 Angiosperm View MSA
121349731 5274 Embryophyte View MSA
123425778 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.034       Low
cufflinks 66.988     High High
cufflinks 57.012     High  
cufflinks 10.504     High  
cufflinks 50.052     High  
cufflinks 6.505        
cufflinks 7.169        
cufflinks 63.918     High High
cufflinks 4.619        

0 Strain