Gene : Medtr1g098000 M. truncatula Mt4.0v1
Defline:  (1 of 2) KOG4442 - Clathrin coat binding protein/Huntingtin interacting protein HIP1, involved in regulation of endocytosis Description:  histone-lysine N-methyltransferase ASHH1-like protein
Genomic Order:  5457 Name:  ? Medtr1g098000
Secondary Identifier:  ? PAC:31097041
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g098000 0.5kb upstream 0.5kb upstream 4287 true chr1: 44070920-44075206 Medicago truncatula
Medtr1g098000 0.5kb upstream 0.5kb upstream 500 false chr1: 44070920-44071419 Medicago truncatula
Medtr1g098000 0.5kb downstream 0.5kb downstream 4287 true chr1: 44071420-44075706 Medicago truncatula
Medtr1g098000 0.5kb downstream 0.5kb downstream 500 false chr1: 44075207-44075706 Medicago truncatula
Medtr1g098000 1.0kb upstream 1.0kb upstream 4787 true chr1: 44070420-44075206 Medicago truncatula
Medtr1g098000 1.0kb upstream 1.0kb upstream 1000 false chr1: 44070420-44071419 Medicago truncatula
Medtr1g098000 1.0kb downstream 1.0kb downstream 4787 true chr1: 44071420-44076206 Medicago truncatula
Medtr1g098000 1.0kb downstream 1.0kb downstream 1000 false chr1: 44075207-44076206 Medicago truncatula
Medtr1g098000 2.0kb upstream 2.0kb upstream 5787 true chr1: 44069420-44075206 Medicago truncatula
Medtr1g098000 2.0kb upstream 2.0kb upstream 2000 false chr1: 44069420-44071419 Medicago truncatula
Medtr1g098000 2.0kb downstream 2.0kb downstream 5787 true chr1: 44071420-44077206 Medicago truncatula
Medtr1g098000 2.0kb downstream 2.0kb downstream 2000 false chr1: 44075207-44077206 Medicago truncatula
Medtr1g098000 5.0kb upstream 5.0kb upstream 8787 true chr1: 44066420-44075206 Medicago truncatula
Medtr1g098000 5.0kb upstream 5.0kb upstream 5000 false chr1: 44066420-44071419 Medicago truncatula
Medtr1g098000 5.0kb downstream 5.0kb downstream 8787 true chr1: 44071420-44080206 Medicago truncatula
Medtr1g098000 5.0kb downstream 5.0kb downstream 5000 false chr1: 44075207-44080206 Medicago truncatula
Medtr1g098000 10.0kb upstream 10.0kb upstream 13787 true chr1: 44061420-44075206 Medicago truncatula
Medtr1g098000 10.0kb upstream 10.0kb upstream 10000 false chr1: 44061420-44071419 Medicago truncatula
Medtr1g098000 10.0kb downstream 10.0kb downstream 13787 true chr1: 44071420-44085206 Medicago truncatula
Medtr1g098000 10.0kb downstream 10.0kb downstream 10000 false chr1: 44075207-44085206 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297403 5265 Fabidae View MSA
124065473 5270 Rosid View MSA
123751966 5271 Pentapetalae View MSA
122790455 5272 Eudicot View MSA
122049912 5273 Angiosperm View MSA
123428946 5275 Viridiplantae View MSA
121350319 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.112       High
cufflinks 0.044     Low  
cufflinks 0.038     Low  
cufflinks 0.03     Low Low
cufflinks 0.08        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.048     Low  
cufflinks 0.026     Low Low
cufflinks 0.088     Low High

0 Strain