Gene : Medtr1g098160 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR36319:SF1 - PROTEIN GIGANTEA Description:  gigantea protein 1B
Genomic Order:  5470 Name:  ? Medtr1g098160
Secondary Identifier:  ? PAC:31100485
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g098160 0.5kb upstream 0.5kb upstream 9774 true chr1: 44168200-44177973 Medicago truncatula
Medtr1g098160 0.5kb upstream 0.5kb upstream 500 false chr1: 44168200-44168699 Medicago truncatula
Medtr1g098160 0.5kb downstream 0.5kb downstream 9774 true chr1: 44168700-44178473 Medicago truncatula
Medtr1g098160 0.5kb downstream 0.5kb downstream 500 false chr1: 44177974-44178473 Medicago truncatula
Medtr1g098160 1.0kb upstream 1.0kb upstream 10274 true chr1: 44167700-44177973 Medicago truncatula
Medtr1g098160 1.0kb upstream 1.0kb upstream 1000 false chr1: 44167700-44168699 Medicago truncatula
Medtr1g098160 1.0kb downstream 1.0kb downstream 10274 true chr1: 44168700-44178973 Medicago truncatula
Medtr1g098160 1.0kb downstream 1.0kb downstream 1000 false chr1: 44177974-44178973 Medicago truncatula
Medtr1g098160 2.0kb upstream 2.0kb upstream 11274 true chr1: 44166700-44177973 Medicago truncatula
Medtr1g098160 2.0kb upstream 2.0kb upstream 2000 false chr1: 44166700-44168699 Medicago truncatula
Medtr1g098160 2.0kb downstream 2.0kb downstream 11274 true chr1: 44168700-44179973 Medicago truncatula
Medtr1g098160 2.0kb downstream 2.0kb downstream 2000 false chr1: 44177974-44179973 Medicago truncatula
Medtr1g098160 5.0kb upstream 5.0kb upstream 14274 true chr1: 44163700-44177973 Medicago truncatula
Medtr1g098160 5.0kb upstream 5.0kb upstream 5000 false chr1: 44163700-44168699 Medicago truncatula
Medtr1g098160 5.0kb downstream 5.0kb downstream 14274 true chr1: 44168700-44182973 Medicago truncatula
Medtr1g098160 5.0kb downstream 5.0kb downstream 5000 false chr1: 44177974-44182973 Medicago truncatula
Medtr1g098160 10.0kb upstream 10.0kb upstream 19274 true chr1: 44158700-44177973 Medicago truncatula
Medtr1g098160 10.0kb upstream 10.0kb upstream 10000 false chr1: 44158700-44168699 Medicago truncatula
Medtr1g098160 10.0kb downstream 10.0kb downstream 19274 true chr1: 44168700-44187973 Medicago truncatula
Medtr1g098160 10.0kb downstream 10.0kb downstream 10000 false chr1: 44177974-44187973 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307360 5265 Fabidae View MSA
124064536 5270 Rosid View MSA
123738488 5271 Pentapetalae View MSA
122787616 5272 Eudicot View MSA
122046361 5273 Angiosperm View MSA
121310594 5274 Embryophyte View MSA
123348039 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.728     High  
cufflinks 16.287     High  
cufflinks 30.905     High High
cufflinks 11.413     High  
cufflinks 31.853     High High
cufflinks 5.84       Low
cufflinks 21.66     High  
cufflinks 18.204     High  
cufflinks 18.391     High  

0 Strain