Gene : Medtr1g097850 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR22603:SF39 - CHOLINE KINASE 1-RELATED Description:  choline/ethanolamine kinase
Genomic Order:  5461 Name:  ? Medtr1g097850
Secondary Identifier:  ? PAC:31092694
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-3385 Medicago truncatula pathologic  
Mtruncatula PWY3O-450 Medicago truncatula pathologic  
Mtruncatula PWY4FS-6 Medicago truncatula pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g097850 0.5kb upstream 0.5kb upstream 4246 true chr1: 44102278-44106523 Medicago truncatula
Medtr1g097850 0.5kb upstream 0.5kb upstream 500 false chr1: 44106024-44106523 Medicago truncatula
Medtr1g097850 0.5kb downstream 0.5kb downstream 4246 true chr1: 44101778-44106023 Medicago truncatula
Medtr1g097850 0.5kb downstream 0.5kb downstream 500 false chr1: 44101778-44102277 Medicago truncatula
Medtr1g097850 1.0kb upstream 1.0kb upstream 4746 true chr1: 44102278-44107023 Medicago truncatula
Medtr1g097850 1.0kb upstream 1.0kb upstream 1000 false chr1: 44106024-44107023 Medicago truncatula
Medtr1g097850 1.0kb downstream 1.0kb downstream 4746 true chr1: 44101278-44106023 Medicago truncatula
Medtr1g097850 1.0kb downstream 1.0kb downstream 1000 false chr1: 44101278-44102277 Medicago truncatula
Medtr1g097850 2.0kb upstream 2.0kb upstream 5746 true chr1: 44102278-44108023 Medicago truncatula
Medtr1g097850 2.0kb upstream 2.0kb upstream 2000 false chr1: 44106024-44108023 Medicago truncatula
Medtr1g097850 2.0kb downstream 2.0kb downstream 5746 true chr1: 44100278-44106023 Medicago truncatula
Medtr1g097850 2.0kb downstream 2.0kb downstream 2000 false chr1: 44100278-44102277 Medicago truncatula
Medtr1g097850 5.0kb upstream 5.0kb upstream 8746 true chr1: 44102278-44111023 Medicago truncatula
Medtr1g097850 5.0kb upstream 5.0kb upstream 5000 false chr1: 44106024-44111023 Medicago truncatula
Medtr1g097850 5.0kb downstream 5.0kb downstream 8746 true chr1: 44097278-44106023 Medicago truncatula
Medtr1g097850 5.0kb downstream 5.0kb downstream 5000 false chr1: 44097278-44102277 Medicago truncatula
Medtr1g097850 10.0kb upstream 10.0kb upstream 13746 true chr1: 44102278-44116023 Medicago truncatula
Medtr1g097850 10.0kb upstream 10.0kb upstream 10000 false chr1: 44106024-44116023 Medicago truncatula
Medtr1g097850 10.0kb downstream 10.0kb downstream 13746 true chr1: 44092278-44106023 Medicago truncatula
Medtr1g097850 10.0kb downstream 10.0kb downstream 10000 false chr1: 44092278-44102277 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311650 5265 Fabidae View MSA
124069180 5270 Rosid View MSA
123746925 5271 Pentapetalae View MSA
122797485 5272 Eudicot View MSA
122047896 5273 Angiosperm View MSA
121347088 5274 Embryophyte View MSA
123426626 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.798     High  
cufflinks 13.621     High Low
cufflinks 32.777     High  
cufflinks 14.046     High Low
cufflinks 18.419     High  
cufflinks 14.854     High  
cufflinks 40.909     High High
cufflinks 19.071     High  
cufflinks 36.349     High High

0 Strain