Gene : Medtr1g099420 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10794:SF58 - CAAX AMINO TERMINAL PROTEASE FAMILY PROTEIN Description:  CAAX amino terminal protease family protein
Genomic Order:  5561 Name:  ? Medtr1g099420
Secondary Identifier:  ? PAC:31094488
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g099420 0.5kb upstream 0.5kb upstream 4627 true chr1: 44896557-44901183 Medicago truncatula
Medtr1g099420 0.5kb upstream 0.5kb upstream 500 false chr1: 44896557-44897056 Medicago truncatula
Medtr1g099420 0.5kb downstream 0.5kb downstream 4627 true chr1: 44897057-44901683 Medicago truncatula
Medtr1g099420 0.5kb downstream 0.5kb downstream 500 false chr1: 44901184-44901683 Medicago truncatula
Medtr1g099420 1.0kb upstream 1.0kb upstream 5127 true chr1: 44896057-44901183 Medicago truncatula
Medtr1g099420 1.0kb upstream 1.0kb upstream 1000 false chr1: 44896057-44897056 Medicago truncatula
Medtr1g099420 1.0kb downstream 1.0kb downstream 5127 true chr1: 44897057-44902183 Medicago truncatula
Medtr1g099420 1.0kb downstream 1.0kb downstream 1000 false chr1: 44901184-44902183 Medicago truncatula
Medtr1g099420 2.0kb upstream 2.0kb upstream 6127 true chr1: 44895057-44901183 Medicago truncatula
Medtr1g099420 2.0kb upstream 2.0kb upstream 2000 false chr1: 44895057-44897056 Medicago truncatula
Medtr1g099420 2.0kb downstream 2.0kb downstream 6127 true chr1: 44897057-44903183 Medicago truncatula
Medtr1g099420 2.0kb downstream 2.0kb downstream 2000 false chr1: 44901184-44903183 Medicago truncatula
Medtr1g099420 5.0kb upstream 5.0kb upstream 9127 true chr1: 44892057-44901183 Medicago truncatula
Medtr1g099420 5.0kb upstream 5.0kb upstream 5000 false chr1: 44892057-44897056 Medicago truncatula
Medtr1g099420 5.0kb downstream 5.0kb downstream 9127 true chr1: 44897057-44906183 Medicago truncatula
Medtr1g099420 5.0kb downstream 5.0kb downstream 5000 false chr1: 44901184-44906183 Medicago truncatula
Medtr1g099420 10.0kb upstream 10.0kb upstream 14127 true chr1: 44887057-44901183 Medicago truncatula
Medtr1g099420 10.0kb upstream 10.0kb upstream 10000 false chr1: 44887057-44897056 Medicago truncatula
Medtr1g099420 10.0kb downstream 10.0kb downstream 14127 true chr1: 44897057-44911183 Medicago truncatula
Medtr1g099420 10.0kb downstream 10.0kb downstream 10000 false chr1: 44901184-44911183 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122316138 5265 Fabidae View MSA
124068174 5270 Rosid View MSA
123739909 5271 Pentapetalae View MSA
122789492 5272 Eudicot View MSA
122042662 5273 Angiosperm View MSA
121345279 5274 Embryophyte View MSA
123428279 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.058       Low
cufflinks 6.24        
cufflinks 11.57     High High
cufflinks 8.268        
cufflinks 6.687        
cufflinks 6.354        
cufflinks 5.003       Low
cufflinks 9.891     High High
cufflinks 5.242        

0 Strain