Gene : Medtr1g100130 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11972:SF62 - FERRIC REDUCTION OXIDASE 4-RELATED Description:  oxidoreductase/ferric-chelate reductase
Genomic Order:  5598 Name:  ? Medtr1g100130
Secondary Identifier:  ? PAC:31098725
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5934 Medicago truncatula pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g100130 0.5kb upstream 0.5kb upstream 6841 true chr1: 45107568-45114408 Medicago truncatula
Medtr1g100130 0.5kb upstream 0.5kb upstream 500 false chr1: 45107568-45108067 Medicago truncatula
Medtr1g100130 0.5kb downstream 0.5kb downstream 6841 true chr1: 45108068-45114908 Medicago truncatula
Medtr1g100130 0.5kb downstream 0.5kb downstream 500 false chr1: 45114409-45114908 Medicago truncatula
Medtr1g100130 1.0kb upstream 1.0kb upstream 7341 true chr1: 45107068-45114408 Medicago truncatula
Medtr1g100130 1.0kb upstream 1.0kb upstream 1000 false chr1: 45107068-45108067 Medicago truncatula
Medtr1g100130 1.0kb downstream 1.0kb downstream 7341 true chr1: 45108068-45115408 Medicago truncatula
Medtr1g100130 1.0kb downstream 1.0kb downstream 1000 false chr1: 45114409-45115408 Medicago truncatula
Medtr1g100130 2.0kb upstream 2.0kb upstream 8341 true chr1: 45106068-45114408 Medicago truncatula
Medtr1g100130 2.0kb upstream 2.0kb upstream 2000 false chr1: 45106068-45108067 Medicago truncatula
Medtr1g100130 2.0kb downstream 2.0kb downstream 8341 true chr1: 45108068-45116408 Medicago truncatula
Medtr1g100130 2.0kb downstream 2.0kb downstream 2000 false chr1: 45114409-45116408 Medicago truncatula
Medtr1g100130 5.0kb upstream 5.0kb upstream 11341 true chr1: 45103068-45114408 Medicago truncatula
Medtr1g100130 5.0kb upstream 5.0kb upstream 5000 false chr1: 45103068-45108067 Medicago truncatula
Medtr1g100130 5.0kb downstream 5.0kb downstream 11341 true chr1: 45108068-45119408 Medicago truncatula
Medtr1g100130 5.0kb downstream 5.0kb downstream 5000 false chr1: 45114409-45119408 Medicago truncatula
Medtr1g100130 10.0kb upstream 10.0kb upstream 16341 true chr1: 45098068-45114408 Medicago truncatula
Medtr1g100130 10.0kb upstream 10.0kb upstream 10000 false chr1: 45098068-45108067 Medicago truncatula
Medtr1g100130 10.0kb downstream 10.0kb downstream 16341 true chr1: 45108068-45124408 Medicago truncatula
Medtr1g100130 10.0kb downstream 10.0kb downstream 10000 false chr1: 45114409-45124408 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312218 5265 Fabidae View MSA
124071281 5270 Rosid View MSA
123746738 5271 Pentapetalae View MSA
122787767 5272 Eudicot View MSA
122051677 5273 Angiosperm View MSA
121345980 5274 Embryophyte View MSA
123428579 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.012     Low  
cufflinks 4.602       High
cufflinks 1.45        
cufflinks 0.007     Low  
cufflinks 4.037       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low  
cufflinks 2.408        
cufflinks 0.007     Low  

0 Strain