Gene : Medtr1g089750 M. truncatula Mt4.0v1
Defline:  (1 of 10) PTHR12396:SF10 - METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 1-RELATED Description:  methyl-CpG-binding domain protein
Genomic Order:  4960 Name:  ? Medtr1g089750
Secondary Identifier:  ? PAC:31098290
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g089750 0.5kb upstream 0.5kb upstream 2490 true chr1: 40166943-40169432 Medicago truncatula
Medtr1g089750 0.5kb upstream 0.5kb upstream 500 false chr1: 40166943-40167442 Medicago truncatula
Medtr1g089750 0.5kb downstream 0.5kb downstream 2490 true chr1: 40167443-40169932 Medicago truncatula
Medtr1g089750 0.5kb downstream 0.5kb downstream 500 false chr1: 40169433-40169932 Medicago truncatula
Medtr1g089750 1.0kb upstream 1.0kb upstream 2990 true chr1: 40166443-40169432 Medicago truncatula
Medtr1g089750 1.0kb upstream 1.0kb upstream 1000 false chr1: 40166443-40167442 Medicago truncatula
Medtr1g089750 1.0kb downstream 1.0kb downstream 2990 true chr1: 40167443-40170432 Medicago truncatula
Medtr1g089750 1.0kb downstream 1.0kb downstream 1000 false chr1: 40169433-40170432 Medicago truncatula
Medtr1g089750 2.0kb upstream 2.0kb upstream 3990 true chr1: 40165443-40169432 Medicago truncatula
Medtr1g089750 2.0kb upstream 2.0kb upstream 2000 false chr1: 40165443-40167442 Medicago truncatula
Medtr1g089750 2.0kb downstream 2.0kb downstream 3990 true chr1: 40167443-40171432 Medicago truncatula
Medtr1g089750 2.0kb downstream 2.0kb downstream 2000 false chr1: 40169433-40171432 Medicago truncatula
Medtr1g089750 5.0kb upstream 5.0kb upstream 6990 true chr1: 40162443-40169432 Medicago truncatula
Medtr1g089750 5.0kb upstream 5.0kb upstream 5000 false chr1: 40162443-40167442 Medicago truncatula
Medtr1g089750 5.0kb downstream 5.0kb downstream 6990 true chr1: 40167443-40174432 Medicago truncatula
Medtr1g089750 5.0kb downstream 5.0kb downstream 5000 false chr1: 40169433-40174432 Medicago truncatula
Medtr1g089750 10.0kb upstream 10.0kb upstream 11990 true chr1: 40157443-40169432 Medicago truncatula
Medtr1g089750 10.0kb upstream 10.0kb upstream 10000 false chr1: 40157443-40167442 Medicago truncatula
Medtr1g089750 10.0kb downstream 10.0kb downstream 11990 true chr1: 40167443-40179432 Medicago truncatula
Medtr1g089750 10.0kb downstream 10.0kb downstream 10000 false chr1: 40169433-40179432 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304783 5265 Fabidae View MSA
124061100 5270 Rosid View MSA
123741476 5271 Pentapetalae View MSA
122793205 5272 Eudicot View MSA
122043544 5273 Angiosperm View MSA
121310145 5274 Embryophyte View MSA
123347714 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.123       High
cufflinks 5.317        
cufflinks 4.689        
cufflinks 2.803        
cufflinks 5.888        
cufflinks 1.436       Low
cufflinks 4.122        
cufflinks 4.547        
cufflinks 2.27       Low

0 Strain