Gene : Medtr1g089005 M. truncatula Mt4.0v1
Defline:  (1 of 133) 1.11.1.7 - Peroxidase / Lactoperoxidase Description:  peroxidase family protein
Genomic Order:  4934 Name:  ? Medtr1g089005
Secondary Identifier:  ? PAC:31100089
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4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5466 Medicago truncatula pathologic  
Mtruncatula PWY-6824 Medicago truncatula pathologic  
Mtruncatula PWY-7214 Medicago truncatula pathologic  
Mtruncatula PWY-7445 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g089005 0.5kb upstream 0.5kb upstream 1585 true chr1: 39998908-40000492 Medicago truncatula
Medtr1g089005 0.5kb upstream 0.5kb upstream 500 false chr1: 39998908-39999407 Medicago truncatula
Medtr1g089005 0.5kb downstream 0.5kb downstream 1585 true chr1: 39999408-40000992 Medicago truncatula
Medtr1g089005 0.5kb downstream 0.5kb downstream 500 false chr1: 40000493-40000992 Medicago truncatula
Medtr1g089005 1.0kb upstream 1.0kb upstream 2085 true chr1: 39998408-40000492 Medicago truncatula
Medtr1g089005 1.0kb upstream 1.0kb upstream 1000 false chr1: 39998408-39999407 Medicago truncatula
Medtr1g089005 1.0kb downstream 1.0kb downstream 2085 true chr1: 39999408-40001492 Medicago truncatula
Medtr1g089005 1.0kb downstream 1.0kb downstream 1000 false chr1: 40000493-40001492 Medicago truncatula
Medtr1g089005 2.0kb upstream 2.0kb upstream 3085 true chr1: 39997408-40000492 Medicago truncatula
Medtr1g089005 2.0kb upstream 2.0kb upstream 2000 false chr1: 39997408-39999407 Medicago truncatula
Medtr1g089005 2.0kb downstream 2.0kb downstream 3085 true chr1: 39999408-40002492 Medicago truncatula
Medtr1g089005 2.0kb downstream 2.0kb downstream 2000 false chr1: 40000493-40002492 Medicago truncatula
Medtr1g089005 5.0kb upstream 5.0kb upstream 6085 true chr1: 39994408-40000492 Medicago truncatula
Medtr1g089005 5.0kb upstream 5.0kb upstream 5000 false chr1: 39994408-39999407 Medicago truncatula
Medtr1g089005 5.0kb downstream 5.0kb downstream 6085 true chr1: 39999408-40005492 Medicago truncatula
Medtr1g089005 5.0kb downstream 5.0kb downstream 5000 false chr1: 40000493-40005492 Medicago truncatula
Medtr1g089005 10.0kb upstream 10.0kb upstream 11085 true chr1: 39989408-40000492 Medicago truncatula
Medtr1g089005 10.0kb upstream 10.0kb upstream 10000 false chr1: 39989408-39999407 Medicago truncatula
Medtr1g089005 10.0kb downstream 10.0kb downstream 11085 true chr1: 39999408-40010492 Medicago truncatula
Medtr1g089005 10.0kb downstream 10.0kb downstream 10000 false chr1: 40000493-40010492 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297917 5265 Fabidae View MSA
124074807 5270 Rosid View MSA
123752607 5271 Pentapetalae View MSA
122796741 5272 Eudicot View MSA
122051577 5273 Angiosperm View MSA
121351674 5274 Embryophyte View MSA
123426672 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.046     Low  
cufflinks 0.212        
cufflinks 0.622       High
cufflinks 0.021     Low Low
cufflinks 0.477        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.284        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain