Gene : Medtr1g090020 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR23257//PTHR23257:SF478 - SERINE-THREONINE PROTEIN KINASE Description:  octicosapeptide/phox/Bem1p domain kinase superfamily protein
Genomic Order:  4977 Name:  ? Medtr1g090020
Secondary Identifier:  ? PAC:31097978
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g090020 0.5kb upstream 0.5kb upstream 5745 true chr1: 40306008-40311752 Medicago truncatula
Medtr1g090020 0.5kb upstream 0.5kb upstream 500 false chr1: 40311253-40311752 Medicago truncatula
Medtr1g090020 0.5kb downstream 0.5kb downstream 5745 true chr1: 40305508-40311252 Medicago truncatula
Medtr1g090020 0.5kb downstream 0.5kb downstream 500 false chr1: 40305508-40306007 Medicago truncatula
Medtr1g090020 1.0kb upstream 1.0kb upstream 6245 true chr1: 40306008-40312252 Medicago truncatula
Medtr1g090020 1.0kb upstream 1.0kb upstream 1000 false chr1: 40311253-40312252 Medicago truncatula
Medtr1g090020 1.0kb downstream 1.0kb downstream 6245 true chr1: 40305008-40311252 Medicago truncatula
Medtr1g090020 1.0kb downstream 1.0kb downstream 1000 false chr1: 40305008-40306007 Medicago truncatula
Medtr1g090020 2.0kb upstream 2.0kb upstream 7245 true chr1: 40306008-40313252 Medicago truncatula
Medtr1g090020 2.0kb upstream 2.0kb upstream 2000 false chr1: 40311253-40313252 Medicago truncatula
Medtr1g090020 2.0kb downstream 2.0kb downstream 7245 true chr1: 40304008-40311252 Medicago truncatula
Medtr1g090020 2.0kb downstream 2.0kb downstream 2000 false chr1: 40304008-40306007 Medicago truncatula
Medtr1g090020 5.0kb upstream 5.0kb upstream 10245 true chr1: 40306008-40316252 Medicago truncatula
Medtr1g090020 5.0kb upstream 5.0kb upstream 5000 false chr1: 40311253-40316252 Medicago truncatula
Medtr1g090020 5.0kb downstream 5.0kb downstream 10245 true chr1: 40301008-40311252 Medicago truncatula
Medtr1g090020 5.0kb downstream 5.0kb downstream 5000 false chr1: 40301008-40306007 Medicago truncatula
Medtr1g090020 10.0kb upstream 10.0kb upstream 15245 true chr1: 40306008-40321252 Medicago truncatula
Medtr1g090020 10.0kb upstream 10.0kb upstream 10000 false chr1: 40311253-40321252 Medicago truncatula
Medtr1g090020 10.0kb downstream 10.0kb downstream 15245 true chr1: 40296008-40311252 Medicago truncatula
Medtr1g090020 10.0kb downstream 10.0kb downstream 10000 false chr1: 40296008-40306007 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301831 5265 Fabidae View MSA
124060583 5270 Rosid View MSA
123749730 5271 Pentapetalae View MSA
122796699 5272 Eudicot View MSA
122043276 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350927 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.045     Low  
cufflinks 0.007     Low  
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.093     Low High
cufflinks 0.027     Low  
cufflinks 0.004     Low Low
cufflinks 0.006     Low  

0 Strain