Gene : Medtr1g090827 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR19876//PTHR19876:SF7 - COATOMER Description:  coatomer subunit alpha-like protein
Genomic Order:  5070 Name:  ? Medtr1g090827
Secondary Identifier:  ? PAC:31096409
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g090827 0.5kb upstream 0.5kb upstream 5394 true chr1: 40850967-40856360 Medicago truncatula
Medtr1g090827 0.5kb upstream 0.5kb upstream 500 false chr1: 40855861-40856360 Medicago truncatula
Medtr1g090827 0.5kb downstream 0.5kb downstream 5394 true chr1: 40850467-40855860 Medicago truncatula
Medtr1g090827 0.5kb downstream 0.5kb downstream 500 false chr1: 40850467-40850966 Medicago truncatula
Medtr1g090827 1.0kb upstream 1.0kb upstream 5894 true chr1: 40850967-40856860 Medicago truncatula
Medtr1g090827 1.0kb upstream 1.0kb upstream 1000 false chr1: 40855861-40856860 Medicago truncatula
Medtr1g090827 1.0kb downstream 1.0kb downstream 5894 true chr1: 40849967-40855860 Medicago truncatula
Medtr1g090827 1.0kb downstream 1.0kb downstream 1000 false chr1: 40849967-40850966 Medicago truncatula
Medtr1g090827 2.0kb upstream 2.0kb upstream 6894 true chr1: 40850967-40857860 Medicago truncatula
Medtr1g090827 2.0kb upstream 2.0kb upstream 2000 false chr1: 40855861-40857860 Medicago truncatula
Medtr1g090827 2.0kb downstream 2.0kb downstream 6894 true chr1: 40848967-40855860 Medicago truncatula
Medtr1g090827 2.0kb downstream 2.0kb downstream 2000 false chr1: 40848967-40850966 Medicago truncatula
Medtr1g090827 5.0kb upstream 5.0kb upstream 9894 true chr1: 40850967-40860860 Medicago truncatula
Medtr1g090827 5.0kb upstream 5.0kb upstream 5000 false chr1: 40855861-40860860 Medicago truncatula
Medtr1g090827 5.0kb downstream 5.0kb downstream 9894 true chr1: 40845967-40855860 Medicago truncatula
Medtr1g090827 5.0kb downstream 5.0kb downstream 5000 false chr1: 40845967-40850966 Medicago truncatula
Medtr1g090827 10.0kb upstream 10.0kb upstream 14894 true chr1: 40850967-40865860 Medicago truncatula
Medtr1g090827 10.0kb upstream 10.0kb upstream 10000 false chr1: 40855861-40865860 Medicago truncatula
Medtr1g090827 10.0kb downstream 10.0kb downstream 14894 true chr1: 40840967-40855860 Medicago truncatula
Medtr1g090827 10.0kb downstream 10.0kb downstream 10000 false chr1: 40840967-40850966 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309871 5265 Fabidae View MSA
124068022 5270 Rosid View MSA
123750852 5271 Pentapetalae View MSA
122787725 5272 Eudicot View MSA
122046406 5273 Angiosperm View MSA
121345159 5274 Embryophyte View MSA
123428224 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.304     High  
cufflinks 17.915     High  
cufflinks 14.286     High  
cufflinks 10.226     High  
cufflinks 18.499     High  
cufflinks 5.168       Low
cufflinks 13.024     High  
cufflinks 13.776     High  
cufflinks 21.353     High  

0 Strain