Gene : Medtr1g093600 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31140:SF3 - AP2/ERF AND B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR RAV2-RELATED Description:  AP2/ERF and B3 domain transcription factor
Genomic Order:  5195 Name:  ? Medtr1g093600
Secondary Identifier:  ? PAC:31096352
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g093600 0.5kb upstream 0.5kb upstream 2307 true chr1: 41951396-41953702 Medicago truncatula
Medtr1g093600 0.5kb upstream 0.5kb upstream 500 false chr1: 41953203-41953702 Medicago truncatula
Medtr1g093600 0.5kb downstream 0.5kb downstream 2307 true chr1: 41950896-41953202 Medicago truncatula
Medtr1g093600 0.5kb downstream 0.5kb downstream 500 false chr1: 41950896-41951395 Medicago truncatula
Medtr1g093600 1.0kb upstream 1.0kb upstream 2807 true chr1: 41951396-41954202 Medicago truncatula
Medtr1g093600 1.0kb upstream 1.0kb upstream 1000 false chr1: 41953203-41954202 Medicago truncatula
Medtr1g093600 1.0kb downstream 1.0kb downstream 2807 true chr1: 41950396-41953202 Medicago truncatula
Medtr1g093600 1.0kb downstream 1.0kb downstream 1000 false chr1: 41950396-41951395 Medicago truncatula
Medtr1g093600 2.0kb upstream 2.0kb upstream 3807 true chr1: 41951396-41955202 Medicago truncatula
Medtr1g093600 2.0kb upstream 2.0kb upstream 2000 false chr1: 41953203-41955202 Medicago truncatula
Medtr1g093600 2.0kb downstream 2.0kb downstream 3807 true chr1: 41949396-41953202 Medicago truncatula
Medtr1g093600 2.0kb downstream 2.0kb downstream 2000 false chr1: 41949396-41951395 Medicago truncatula
Medtr1g093600 5.0kb upstream 5.0kb upstream 6807 true chr1: 41951396-41958202 Medicago truncatula
Medtr1g093600 5.0kb upstream 5.0kb upstream 5000 false chr1: 41953203-41958202 Medicago truncatula
Medtr1g093600 5.0kb downstream 5.0kb downstream 6807 true chr1: 41946396-41953202 Medicago truncatula
Medtr1g093600 5.0kb downstream 5.0kb downstream 5000 false chr1: 41946396-41951395 Medicago truncatula
Medtr1g093600 10.0kb upstream 10.0kb upstream 11807 true chr1: 41951396-41963202 Medicago truncatula
Medtr1g093600 10.0kb upstream 10.0kb upstream 10000 false chr1: 41953203-41963202 Medicago truncatula
Medtr1g093600 10.0kb downstream 10.0kb downstream 11807 true chr1: 41941396-41953202 Medicago truncatula
Medtr1g093600 10.0kb downstream 10.0kb downstream 10000 false chr1: 41941396-41951395 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296604 5265 Fabidae View MSA
124042753 5270 Rosid View MSA
123612922 5271 Pentapetalae View MSA
122647401 5272 Eudicot View MSA
122047550 5273 Angiosperm View MSA
121310758 5274 Embryophyte View MSA
123428387 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 188.782     High  
cufflinks 322.122     High  
cufflinks 250.192     High  
cufflinks 203.489     High  
cufflinks 328.764     High  
cufflinks 46.514     High Low
cufflinks 355.439     High  
cufflinks 348.842     High  
cufflinks 409.391     High  

0 Strain