Gene : Medtr2g015010 M. truncatula Mt4.0v1
Defline:  (1 of 1) 5.3.1.16 - 1-(5-phosphoribosyl)-5- ((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase / Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase Description:  aldolase-type TIM barrel family protein
Genomic Order:  650 Name:  ? Medtr2g015010
Secondary Identifier:  ? PAC:31063091
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula HISTSYN-PWY Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g015010 0.5kb upstream 0.5kb upstream 7294 true chr2: 4401664-4408957 Medicago truncatula
Medtr2g015010 0.5kb upstream 0.5kb upstream 500 false chr2: 4408458-4408957 Medicago truncatula
Medtr2g015010 0.5kb downstream 0.5kb downstream 7294 true chr2: 4401164-4408457 Medicago truncatula
Medtr2g015010 0.5kb downstream 0.5kb downstream 500 false chr2: 4401164-4401663 Medicago truncatula
Medtr2g015010 1.0kb upstream 1.0kb upstream 7794 true chr2: 4401664-4409457 Medicago truncatula
Medtr2g015010 1.0kb upstream 1.0kb upstream 1000 false chr2: 4408458-4409457 Medicago truncatula
Medtr2g015010 1.0kb downstream 1.0kb downstream 7794 true chr2: 4400664-4408457 Medicago truncatula
Medtr2g015010 1.0kb downstream 1.0kb downstream 1000 false chr2: 4400664-4401663 Medicago truncatula
Medtr2g015010 2.0kb upstream 2.0kb upstream 8794 true chr2: 4401664-4410457 Medicago truncatula
Medtr2g015010 2.0kb upstream 2.0kb upstream 2000 false chr2: 4408458-4410457 Medicago truncatula
Medtr2g015010 2.0kb downstream 2.0kb downstream 8794 true chr2: 4399664-4408457 Medicago truncatula
Medtr2g015010 2.0kb downstream 2.0kb downstream 2000 false chr2: 4399664-4401663 Medicago truncatula
Medtr2g015010 5.0kb upstream 5.0kb upstream 11794 true chr2: 4401664-4413457 Medicago truncatula
Medtr2g015010 5.0kb upstream 5.0kb upstream 5000 false chr2: 4408458-4413457 Medicago truncatula
Medtr2g015010 5.0kb downstream 5.0kb downstream 11794 true chr2: 4396664-4408457 Medicago truncatula
Medtr2g015010 5.0kb downstream 5.0kb downstream 5000 false chr2: 4396664-4401663 Medicago truncatula
Medtr2g015010 10.0kb upstream 10.0kb upstream 16794 true chr2: 4401664-4418457 Medicago truncatula
Medtr2g015010 10.0kb upstream 10.0kb upstream 10000 false chr2: 4408458-4418457 Medicago truncatula
Medtr2g015010 10.0kb downstream 10.0kb downstream 16794 true chr2: 4391664-4408457 Medicago truncatula
Medtr2g015010 10.0kb downstream 10.0kb downstream 10000 false chr2: 4391664-4401663 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041281 5273 Angiosperm View MSA
122305339 5265 Fabidae View MSA
124061773 5270 Rosid View MSA
123737700 5271 Pentapetalae View MSA
122790553 5272 Eudicot View MSA
121347171 5274 Embryophyte View MSA
123424389 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.674        
cufflinks 1.462        
cufflinks 0.882        
cufflinks 0.584        
cufflinks 2.723       High
cufflinks 0.108     Low Low
cufflinks 0.695        
cufflinks 1.04        
cufflinks 1.49        

0 Strain