Gene : Medtr2g014680 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR31079:SF5 - NAC DOMAIN CONTAINING PROTEIN 10 Description:  NAC transcription factor-like protein
Genomic Order:  621 Name:  ? Medtr2g014680
Secondary Identifier:  ? PAC:31067965
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g014680 0.5kb upstream 0.5kb upstream 4101 true chr2: 4232301-4236401 Medicago truncatula
Medtr2g014680 0.5kb upstream 0.5kb upstream 500 false chr2: 4232301-4232800 Medicago truncatula
Medtr2g014680 0.5kb downstream 0.5kb downstream 4101 true chr2: 4232801-4236901 Medicago truncatula
Medtr2g014680 0.5kb downstream 0.5kb downstream 500 false chr2: 4236402-4236901 Medicago truncatula
Medtr2g014680 1.0kb upstream 1.0kb upstream 4601 true chr2: 4231801-4236401 Medicago truncatula
Medtr2g014680 1.0kb upstream 1.0kb upstream 1000 false chr2: 4231801-4232800 Medicago truncatula
Medtr2g014680 1.0kb downstream 1.0kb downstream 4601 true chr2: 4232801-4237401 Medicago truncatula
Medtr2g014680 1.0kb downstream 1.0kb downstream 1000 false chr2: 4236402-4237401 Medicago truncatula
Medtr2g014680 2.0kb upstream 2.0kb upstream 5601 true chr2: 4230801-4236401 Medicago truncatula
Medtr2g014680 2.0kb upstream 2.0kb upstream 2000 false chr2: 4230801-4232800 Medicago truncatula
Medtr2g014680 2.0kb downstream 2.0kb downstream 5601 true chr2: 4232801-4238401 Medicago truncatula
Medtr2g014680 2.0kb downstream 2.0kb downstream 2000 false chr2: 4236402-4238401 Medicago truncatula
Medtr2g014680 5.0kb upstream 5.0kb upstream 8601 true chr2: 4227801-4236401 Medicago truncatula
Medtr2g014680 5.0kb upstream 5.0kb upstream 5000 false chr2: 4227801-4232800 Medicago truncatula
Medtr2g014680 5.0kb downstream 5.0kb downstream 8601 true chr2: 4232801-4241401 Medicago truncatula
Medtr2g014680 5.0kb downstream 5.0kb downstream 5000 false chr2: 4236402-4241401 Medicago truncatula
Medtr2g014680 10.0kb upstream 10.0kb upstream 13601 true chr2: 4222801-4236401 Medicago truncatula
Medtr2g014680 10.0kb upstream 10.0kb upstream 10000 false chr2: 4222801-4232800 Medicago truncatula
Medtr2g014680 10.0kb downstream 10.0kb downstream 13601 true chr2: 4232801-4246401 Medicago truncatula
Medtr2g014680 10.0kb downstream 10.0kb downstream 10000 false chr2: 4236402-4246401 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122258918 5265 Fabidae Singleton cluster - no MSA
124040630 5270 Rosid View MSA
123744756 5271 Pentapetalae View MSA
122792957 5272 Eudicot View MSA
122048961 5273 Angiosperm View MSA
121311189 5274 Embryophyte View MSA
123348518 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.956     High High
cufflinks 1.412        
cufflinks 0.603       Low
cufflinks 1.134        
cufflinks 1.962        
cufflinks 1.927        
cufflinks 2.836        
cufflinks 1.747        
cufflinks 2.32        

0 Strain