Gene : Medtr2g017800 M. truncatula Mt4.0v1
Defline:  (1 of 109) PF12796 - Ankyrin repeats (3 copies) (Ank_2) Description:  ankyrin repeat protein
Genomic Order:  793 Name:  ? Medtr2g017800
Secondary Identifier:  ? PAC:31068528
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g017800 0.5kb upstream 0.5kb upstream 1596 true chr2: 5331190-5332785 Medicago truncatula
Medtr2g017800 0.5kb upstream 0.5kb upstream 500 false chr2: 5332286-5332785 Medicago truncatula
Medtr2g017800 0.5kb downstream 0.5kb downstream 1596 true chr2: 5330690-5332285 Medicago truncatula
Medtr2g017800 0.5kb downstream 0.5kb downstream 500 false chr2: 5330690-5331189 Medicago truncatula
Medtr2g017800 1.0kb upstream 1.0kb upstream 2096 true chr2: 5331190-5333285 Medicago truncatula
Medtr2g017800 1.0kb upstream 1.0kb upstream 1000 false chr2: 5332286-5333285 Medicago truncatula
Medtr2g017800 1.0kb downstream 1.0kb downstream 2096 true chr2: 5330190-5332285 Medicago truncatula
Medtr2g017800 1.0kb downstream 1.0kb downstream 1000 false chr2: 5330190-5331189 Medicago truncatula
Medtr2g017800 2.0kb upstream 2.0kb upstream 3096 true chr2: 5331190-5334285 Medicago truncatula
Medtr2g017800 2.0kb upstream 2.0kb upstream 2000 false chr2: 5332286-5334285 Medicago truncatula
Medtr2g017800 2.0kb downstream 2.0kb downstream 3096 true chr2: 5329190-5332285 Medicago truncatula
Medtr2g017800 2.0kb downstream 2.0kb downstream 2000 false chr2: 5329190-5331189 Medicago truncatula
Medtr2g017800 5.0kb upstream 5.0kb upstream 6096 true chr2: 5331190-5337285 Medicago truncatula
Medtr2g017800 5.0kb upstream 5.0kb upstream 5000 false chr2: 5332286-5337285 Medicago truncatula
Medtr2g017800 5.0kb downstream 5.0kb downstream 6096 true chr2: 5326190-5332285 Medicago truncatula
Medtr2g017800 5.0kb downstream 5.0kb downstream 5000 false chr2: 5326190-5331189 Medicago truncatula
Medtr2g017800 10.0kb upstream 10.0kb upstream 11096 true chr2: 5331190-5342285 Medicago truncatula
Medtr2g017800 10.0kb upstream 10.0kb upstream 10000 false chr2: 5332286-5342285 Medicago truncatula
Medtr2g017800 10.0kb downstream 10.0kb downstream 11096 true chr2: 5321190-5332285 Medicago truncatula
Medtr2g017800 10.0kb downstream 10.0kb downstream 10000 false chr2: 5321190-5331189 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312793 5265 Fabidae View MSA
124074786 5270 Rosid View MSA
123753624 5271 Pentapetalae View MSA
122797775 5272 Eudicot View MSA
122051097 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351705 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.066     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.024     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.027     Low  

0 Strain