Gene : Medtr2g017865 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11945:SF187 - FLORAL HOMEOTIC PROTEIN AGAMOUS Description:  MADS-box transcription factor
Genomic Order:  828 Name:  ? Medtr2g017865
Secondary Identifier:  ? PAC:31063598
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g017865 0.5kb upstream 0.5kb upstream 8232 true chr2: 5545292-5553523 Medicago truncatula
Medtr2g017865 0.5kb upstream 0.5kb upstream 500 false chr2: 5545292-5545791 Medicago truncatula
Medtr2g017865 0.5kb downstream 0.5kb downstream 8232 true chr2: 5545792-5554023 Medicago truncatula
Medtr2g017865 0.5kb downstream 0.5kb downstream 500 false chr2: 5553524-5554023 Medicago truncatula
Medtr2g017865 1.0kb upstream 1.0kb upstream 8732 true chr2: 5544792-5553523 Medicago truncatula
Medtr2g017865 1.0kb upstream 1.0kb upstream 1000 false chr2: 5544792-5545791 Medicago truncatula
Medtr2g017865 1.0kb downstream 1.0kb downstream 8732 true chr2: 5545792-5554523 Medicago truncatula
Medtr2g017865 1.0kb downstream 1.0kb downstream 1000 false chr2: 5553524-5554523 Medicago truncatula
Medtr2g017865 2.0kb upstream 2.0kb upstream 9732 true chr2: 5543792-5553523 Medicago truncatula
Medtr2g017865 2.0kb upstream 2.0kb upstream 2000 false chr2: 5543792-5545791 Medicago truncatula
Medtr2g017865 2.0kb downstream 2.0kb downstream 9732 true chr2: 5545792-5555523 Medicago truncatula
Medtr2g017865 2.0kb downstream 2.0kb downstream 2000 false chr2: 5553524-5555523 Medicago truncatula
Medtr2g017865 5.0kb upstream 5.0kb upstream 12732 true chr2: 5540792-5553523 Medicago truncatula
Medtr2g017865 5.0kb upstream 5.0kb upstream 5000 false chr2: 5540792-5545791 Medicago truncatula
Medtr2g017865 5.0kb downstream 5.0kb downstream 12732 true chr2: 5545792-5558523 Medicago truncatula
Medtr2g017865 5.0kb downstream 5.0kb downstream 5000 false chr2: 5553524-5558523 Medicago truncatula
Medtr2g017865 10.0kb upstream 10.0kb upstream 17732 true chr2: 5535792-5553523 Medicago truncatula
Medtr2g017865 10.0kb upstream 10.0kb upstream 10000 false chr2: 5535792-5545791 Medicago truncatula
Medtr2g017865 10.0kb downstream 10.0kb downstream 17732 true chr2: 5545792-5563523 Medicago truncatula
Medtr2g017865 10.0kb downstream 10.0kb downstream 10000 false chr2: 5553524-5563523 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311895 5265 Fabidae View MSA
124063483 5270 Rosid View MSA
123747867 5271 Pentapetalae View MSA
122793842 5272 Eudicot View MSA
122049629 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.007     Low Low
cufflinks 0.054     Low  
cufflinks 0.041     Low  
cufflinks 0.006     Low Low
cufflinks 0.039     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.067        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain