Gene : Medtr2g017980 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11669:SF16 - PROTEIN STICHEL-LIKE 3-RELATED Description:  DNA polymerase III subunit gamma/tau
Genomic Order:  780 Name:  ? Medtr2g017980
Secondary Identifier:  ? PAC:31067567
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g017980 0.5kb upstream 0.5kb upstream 6863 true chr2: 5258152-5265014 Medicago truncatula
Medtr2g017980 0.5kb upstream 0.5kb upstream 500 false chr2: 5258152-5258651 Medicago truncatula
Medtr2g017980 0.5kb downstream 0.5kb downstream 6863 true chr2: 5258652-5265514 Medicago truncatula
Medtr2g017980 0.5kb downstream 0.5kb downstream 500 false chr2: 5265015-5265514 Medicago truncatula
Medtr2g017980 1.0kb upstream 1.0kb upstream 7363 true chr2: 5257652-5265014 Medicago truncatula
Medtr2g017980 1.0kb upstream 1.0kb upstream 1000 false chr2: 5257652-5258651 Medicago truncatula
Medtr2g017980 1.0kb downstream 1.0kb downstream 7363 true chr2: 5258652-5266014 Medicago truncatula
Medtr2g017980 1.0kb downstream 1.0kb downstream 1000 false chr2: 5265015-5266014 Medicago truncatula
Medtr2g017980 2.0kb upstream 2.0kb upstream 8363 true chr2: 5256652-5265014 Medicago truncatula
Medtr2g017980 2.0kb upstream 2.0kb upstream 2000 false chr2: 5256652-5258651 Medicago truncatula
Medtr2g017980 2.0kb downstream 2.0kb downstream 8363 true chr2: 5258652-5267014 Medicago truncatula
Medtr2g017980 2.0kb downstream 2.0kb downstream 2000 false chr2: 5265015-5267014 Medicago truncatula
Medtr2g017980 5.0kb upstream 5.0kb upstream 11363 true chr2: 5253652-5265014 Medicago truncatula
Medtr2g017980 5.0kb upstream 5.0kb upstream 5000 false chr2: 5253652-5258651 Medicago truncatula
Medtr2g017980 5.0kb downstream 5.0kb downstream 11363 true chr2: 5258652-5270014 Medicago truncatula
Medtr2g017980 5.0kb downstream 5.0kb downstream 5000 false chr2: 5265015-5270014 Medicago truncatula
Medtr2g017980 10.0kb upstream 10.0kb upstream 16363 true chr2: 5248652-5265014 Medicago truncatula
Medtr2g017980 10.0kb upstream 10.0kb upstream 10000 false chr2: 5248652-5258651 Medicago truncatula
Medtr2g017980 10.0kb downstream 10.0kb downstream 16363 true chr2: 5258652-5275014 Medicago truncatula
Medtr2g017980 10.0kb downstream 10.0kb downstream 10000 false chr2: 5265015-5275014 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040922 5273 Angiosperm View MSA
122298982 5265 Fabidae View MSA
124064207 5270 Rosid View MSA
123751329 5271 Pentapetalae View MSA
122792829 5272 Eudicot View MSA
121349902 5274 Embryophyte View MSA
123381492 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.044     Low Low
cufflinks 1.293        
cufflinks 1.457        
cufflinks 0.07       Low
cufflinks 1.86       High
cufflinks 0.139     Low  
cufflinks 0.259        
cufflinks 1.315        
cufflinks 0.368        

0 Strain