Gene : Medtr2g009140 M. truncatula Mt4.0v1
Defline:  (1 of 1) KOG0919 - C-5 cytosine-specific DNA methylase Description:  DNA (cytosine-5)-methyltransferase
Genomic Order:  257 Name:  ? Medtr2g009140
Secondary Identifier:  ? PAC:31066505
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g009140 0.5kb upstream 0.5kb upstream 5386 true chr2: 1800824-1806209 Medicago truncatula
Medtr2g009140 0.5kb upstream 0.5kb upstream 500 false chr2: 1800824-1801323 Medicago truncatula
Medtr2g009140 0.5kb downstream 0.5kb downstream 5386 true chr2: 1801324-1806709 Medicago truncatula
Medtr2g009140 0.5kb downstream 0.5kb downstream 500 false chr2: 1806210-1806709 Medicago truncatula
Medtr2g009140 1.0kb upstream 1.0kb upstream 5886 true chr2: 1800324-1806209 Medicago truncatula
Medtr2g009140 1.0kb upstream 1.0kb upstream 1000 false chr2: 1800324-1801323 Medicago truncatula
Medtr2g009140 1.0kb downstream 1.0kb downstream 5886 true chr2: 1801324-1807209 Medicago truncatula
Medtr2g009140 1.0kb downstream 1.0kb downstream 1000 false chr2: 1806210-1807209 Medicago truncatula
Medtr2g009140 2.0kb upstream 2.0kb upstream 6886 true chr2: 1799324-1806209 Medicago truncatula
Medtr2g009140 2.0kb upstream 2.0kb upstream 2000 false chr2: 1799324-1801323 Medicago truncatula
Medtr2g009140 2.0kb downstream 2.0kb downstream 6886 true chr2: 1801324-1808209 Medicago truncatula
Medtr2g009140 2.0kb downstream 2.0kb downstream 2000 false chr2: 1806210-1808209 Medicago truncatula
Medtr2g009140 5.0kb upstream 5.0kb upstream 9886 true chr2: 1796324-1806209 Medicago truncatula
Medtr2g009140 5.0kb upstream 5.0kb upstream 5000 false chr2: 1796324-1801323 Medicago truncatula
Medtr2g009140 5.0kb downstream 5.0kb downstream 9886 true chr2: 1801324-1811209 Medicago truncatula
Medtr2g009140 5.0kb downstream 5.0kb downstream 5000 false chr2: 1806210-1811209 Medicago truncatula
Medtr2g009140 10.0kb upstream 10.0kb upstream 14886 true chr2: 1791324-1806209 Medicago truncatula
Medtr2g009140 10.0kb upstream 10.0kb upstream 10000 false chr2: 1791324-1801323 Medicago truncatula
Medtr2g009140 10.0kb downstream 10.0kb downstream 14886 true chr2: 1801324-1816209 Medicago truncatula
Medtr2g009140 10.0kb downstream 10.0kb downstream 10000 false chr2: 1806210-1816209 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299977 5265 Fabidae View MSA
124060952 5270 Rosid View MSA
123740038 5271 Pentapetalae View MSA
122790174 5272 Eudicot View MSA
122042989 5273 Angiosperm View MSA
121345070 5274 Embryophyte View MSA
123423972 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.257        
cufflinks 0.457        
cufflinks 0.488        
cufflinks 0.182        
cufflinks 0.569       High
cufflinks 0.068     Low Low
cufflinks 0.259        
cufflinks 0.481        
cufflinks 0.254        

0 Strain