Gene : Medtr2g010460 M. truncatula Mt4.0v1
Defline:  (1 of 28) 3.1.3.48 - Protein-tyrosine-phosphatase / PTPase Description:  nicotiana tabacum ORF protein
Genomic Order:  346 Name:  ? Medtr2g010460
Secondary Identifier:  ? PAC:31068269
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g010460 0.5kb upstream 0.5kb upstream 3521 true chr2: 2388652-2392172 Medicago truncatula
Medtr2g010460 0.5kb upstream 0.5kb upstream 500 false chr2: 2388652-2389151 Medicago truncatula
Medtr2g010460 0.5kb downstream 0.5kb downstream 3521 true chr2: 2389152-2392672 Medicago truncatula
Medtr2g010460 0.5kb downstream 0.5kb downstream 500 false chr2: 2392173-2392672 Medicago truncatula
Medtr2g010460 1.0kb upstream 1.0kb upstream 4021 true chr2: 2388152-2392172 Medicago truncatula
Medtr2g010460 1.0kb upstream 1.0kb upstream 1000 false chr2: 2388152-2389151 Medicago truncatula
Medtr2g010460 1.0kb downstream 1.0kb downstream 4021 true chr2: 2389152-2393172 Medicago truncatula
Medtr2g010460 1.0kb downstream 1.0kb downstream 1000 false chr2: 2392173-2393172 Medicago truncatula
Medtr2g010460 2.0kb upstream 2.0kb upstream 5021 true chr2: 2387152-2392172 Medicago truncatula
Medtr2g010460 2.0kb upstream 2.0kb upstream 2000 false chr2: 2387152-2389151 Medicago truncatula
Medtr2g010460 2.0kb downstream 2.0kb downstream 5021 true chr2: 2389152-2394172 Medicago truncatula
Medtr2g010460 2.0kb downstream 2.0kb downstream 2000 false chr2: 2392173-2394172 Medicago truncatula
Medtr2g010460 5.0kb upstream 5.0kb upstream 8021 true chr2: 2384152-2392172 Medicago truncatula
Medtr2g010460 5.0kb upstream 5.0kb upstream 5000 false chr2: 2384152-2389151 Medicago truncatula
Medtr2g010460 5.0kb downstream 5.0kb downstream 8021 true chr2: 2389152-2397172 Medicago truncatula
Medtr2g010460 5.0kb downstream 5.0kb downstream 5000 false chr2: 2392173-2397172 Medicago truncatula
Medtr2g010460 10.0kb upstream 10.0kb upstream 13021 true chr2: 2379152-2392172 Medicago truncatula
Medtr2g010460 10.0kb upstream 10.0kb upstream 10000 false chr2: 2379152-2389151 Medicago truncatula
Medtr2g010460 10.0kb downstream 10.0kb downstream 13021 true chr2: 2389152-2402172 Medicago truncatula
Medtr2g010460 10.0kb downstream 10.0kb downstream 10000 false chr2: 2392173-2402172 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304038 5265 Fabidae View MSA
124063683 5270 Rosid View MSA
123738028 5271 Pentapetalae View MSA
122792537 5272 Eudicot View MSA
122047025 5273 Angiosperm View MSA
121345668 5274 Embryophyte View MSA
123426793 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 35.618     High High
cufflinks 10.276     High  
cufflinks 6.861        
cufflinks 16.14     High  
cufflinks 8.032        
cufflinks 5.891       Low
cufflinks 12.752     High  
cufflinks 7.946        
cufflinks 24.091     High High

0 Strain