Gene : Medtr2g013920 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR13935:SF46 - BASIC HELIX-LOOP-HELIX DOMAIN-CONTAINING PROTEIN Description:  helix loop helix DNA-binding domain protein
Genomic Order:  566 Name:  ? Medtr2g013920
Secondary Identifier:  ? PAC:31063655
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g013920 0.5kb upstream 0.5kb upstream 2268 true chr2: 3826220-3828487 Medicago truncatula
Medtr2g013920 0.5kb upstream 0.5kb upstream 500 false chr2: 3826220-3826719 Medicago truncatula
Medtr2g013920 0.5kb downstream 0.5kb downstream 2268 true chr2: 3826720-3828987 Medicago truncatula
Medtr2g013920 0.5kb downstream 0.5kb downstream 500 false chr2: 3828488-3828987 Medicago truncatula
Medtr2g013920 1.0kb upstream 1.0kb upstream 2768 true chr2: 3825720-3828487 Medicago truncatula
Medtr2g013920 1.0kb upstream 1.0kb upstream 1000 false chr2: 3825720-3826719 Medicago truncatula
Medtr2g013920 1.0kb downstream 1.0kb downstream 2768 true chr2: 3826720-3829487 Medicago truncatula
Medtr2g013920 1.0kb downstream 1.0kb downstream 1000 false chr2: 3828488-3829487 Medicago truncatula
Medtr2g013920 2.0kb upstream 2.0kb upstream 3768 true chr2: 3824720-3828487 Medicago truncatula
Medtr2g013920 2.0kb upstream 2.0kb upstream 2000 false chr2: 3824720-3826719 Medicago truncatula
Medtr2g013920 2.0kb downstream 2.0kb downstream 3768 true chr2: 3826720-3830487 Medicago truncatula
Medtr2g013920 2.0kb downstream 2.0kb downstream 2000 false chr2: 3828488-3830487 Medicago truncatula
Medtr2g013920 5.0kb upstream 5.0kb upstream 6768 true chr2: 3821720-3828487 Medicago truncatula
Medtr2g013920 5.0kb upstream 5.0kb upstream 5000 false chr2: 3821720-3826719 Medicago truncatula
Medtr2g013920 5.0kb downstream 5.0kb downstream 6768 true chr2: 3826720-3833487 Medicago truncatula
Medtr2g013920 5.0kb downstream 5.0kb downstream 5000 false chr2: 3828488-3833487 Medicago truncatula
Medtr2g013920 10.0kb upstream 10.0kb upstream 11768 true chr2: 3816720-3828487 Medicago truncatula
Medtr2g013920 10.0kb upstream 10.0kb upstream 10000 false chr2: 3816720-3826719 Medicago truncatula
Medtr2g013920 10.0kb downstream 10.0kb downstream 11768 true chr2: 3826720-3838487 Medicago truncatula
Medtr2g013920 10.0kb downstream 10.0kb downstream 10000 false chr2: 3828488-3838487 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040931 5273 Angiosperm View MSA
122309739 5265 Fabidae View MSA
124073436 5270 Rosid View MSA
123745471 5271 Pentapetalae View MSA
122795033 5272 Eudicot View MSA
121309769 5274 Embryophyte View MSA
123347432 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.038     Low Low
cufflinks 1.159        
cufflinks 0.627        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.125        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.278        
cufflinks 0.017     Low Low

0 Strain