Gene : Medtr1g116900 M. truncatula Mt4.0v1
Defline:  (1 of 2) KOG2866 - Uncharacterized conserved protein Description:  Nse4, component of Smc5/6 DNA repair complex protein
Genomic Order:  6681 Name:  ? Medtr1g116900
Secondary Identifier:  ? PAC:31094953
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g116900 0.5kb upstream 0.5kb upstream 4093 true chr1: 52798334-52802426 Medicago truncatula
Medtr1g116900 0.5kb upstream 0.5kb upstream 500 false chr1: 52801927-52802426 Medicago truncatula
Medtr1g116900 0.5kb downstream 0.5kb downstream 4093 true chr1: 52797834-52801926 Medicago truncatula
Medtr1g116900 0.5kb downstream 0.5kb downstream 500 false chr1: 52797834-52798333 Medicago truncatula
Medtr1g116900 1.0kb upstream 1.0kb upstream 4593 true chr1: 52798334-52802926 Medicago truncatula
Medtr1g116900 1.0kb upstream 1.0kb upstream 1000 false chr1: 52801927-52802926 Medicago truncatula
Medtr1g116900 1.0kb downstream 1.0kb downstream 4593 true chr1: 52797334-52801926 Medicago truncatula
Medtr1g116900 1.0kb downstream 1.0kb downstream 1000 false chr1: 52797334-52798333 Medicago truncatula
Medtr1g116900 2.0kb upstream 2.0kb upstream 5593 true chr1: 52798334-52803926 Medicago truncatula
Medtr1g116900 2.0kb upstream 2.0kb upstream 2000 false chr1: 52801927-52803926 Medicago truncatula
Medtr1g116900 2.0kb downstream 2.0kb downstream 5593 true chr1: 52796334-52801926 Medicago truncatula
Medtr1g116900 2.0kb downstream 2.0kb downstream 2000 false chr1: 52796334-52798333 Medicago truncatula
Medtr1g116900 5.0kb upstream 5.0kb upstream 8593 true chr1: 52798334-52806926 Medicago truncatula
Medtr1g116900 5.0kb upstream 5.0kb upstream 5000 false chr1: 52801927-52806926 Medicago truncatula
Medtr1g116900 5.0kb downstream 5.0kb downstream 8593 true chr1: 52793334-52801926 Medicago truncatula
Medtr1g116900 5.0kb downstream 5.0kb downstream 5000 false chr1: 52793334-52798333 Medicago truncatula
Medtr1g116900 10.0kb upstream 10.0kb upstream 13593 true chr1: 52798334-52811926 Medicago truncatula
Medtr1g116900 10.0kb upstream 10.0kb upstream 10000 false chr1: 52801927-52811926 Medicago truncatula
Medtr1g116900 10.0kb downstream 10.0kb downstream 13593 true chr1: 52788334-52801926 Medicago truncatula
Medtr1g116900 10.0kb downstream 10.0kb downstream 10000 false chr1: 52788334-52798333 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300451 5265 Fabidae View MSA
124070075 5270 Rosid View MSA
123747962 5271 Pentapetalae View MSA
122793690 5272 Eudicot View MSA
122042819 5273 Angiosperm View MSA
121349826 5274 Embryophyte View MSA
123428670 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.652       Low
cufflinks 3.214        
cufflinks 4.45       High
cufflinks 4.741       High
cufflinks 3.291        
cufflinks 2.063       Low
cufflinks 3.298        
cufflinks 3.062        
cufflinks 3.696        

0 Strain