Gene : Medtr2g005410 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR11689:SF91 - CHLORIDE CHANNEL PROTEIN CLC-C Description:  chloride channel ClC1 protein
Genomic Order:  17 Name:  ? Medtr2g005410
Secondary Identifier:  ? PAC:31066629
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g005410 0.5kb upstream 0.5kb upstream 5572 true chr2: 150391-155962 Medicago truncatula
Medtr2g005410 0.5kb upstream 0.5kb upstream 500 false chr2: 150391-150890 Medicago truncatula
Medtr2g005410 0.5kb downstream 0.5kb downstream 5572 true chr2: 150891-156462 Medicago truncatula
Medtr2g005410 0.5kb downstream 0.5kb downstream 500 false chr2: 155963-156462 Medicago truncatula
Medtr2g005410 1.0kb upstream 1.0kb upstream 6072 true chr2: 149891-155962 Medicago truncatula
Medtr2g005410 1.0kb upstream 1.0kb upstream 1000 false chr2: 149891-150890 Medicago truncatula
Medtr2g005410 1.0kb downstream 1.0kb downstream 6072 true chr2: 150891-156962 Medicago truncatula
Medtr2g005410 1.0kb downstream 1.0kb downstream 1000 false chr2: 155963-156962 Medicago truncatula
Medtr2g005410 2.0kb upstream 2.0kb upstream 7072 true chr2: 148891-155962 Medicago truncatula
Medtr2g005410 2.0kb upstream 2.0kb upstream 2000 false chr2: 148891-150890 Medicago truncatula
Medtr2g005410 2.0kb downstream 2.0kb downstream 7072 true chr2: 150891-157962 Medicago truncatula
Medtr2g005410 2.0kb downstream 2.0kb downstream 2000 false chr2: 155963-157962 Medicago truncatula
Medtr2g005410 5.0kb upstream 5.0kb upstream 10072 true chr2: 145891-155962 Medicago truncatula
Medtr2g005410 5.0kb upstream 5.0kb upstream 5000 false chr2: 145891-150890 Medicago truncatula
Medtr2g005410 5.0kb downstream 5.0kb downstream 10072 true chr2: 150891-160962 Medicago truncatula
Medtr2g005410 5.0kb downstream 5.0kb downstream 5000 false chr2: 155963-160962 Medicago truncatula
Medtr2g005410 10.0kb upstream 10.0kb upstream 15072 true chr2: 140891-155962 Medicago truncatula
Medtr2g005410 10.0kb upstream 10.0kb upstream 10000 false chr2: 140891-150890 Medicago truncatula
Medtr2g005410 10.0kb downstream 10.0kb downstream 15072 true chr2: 150891-165962 Medicago truncatula
Medtr2g005410 10.0kb downstream 10.0kb downstream 10000 false chr2: 155963-165962 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122295518 5265 Fabidae View MSA
124069720 5270 Rosid View MSA
123745841 5271 Pentapetalae View MSA
122787304 5272 Eudicot View MSA
122047226 5273 Angiosperm View MSA
121350154 5274 Embryophyte View MSA
123428433 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.803       High
cufflinks 1.545        
cufflinks 1.743        
cufflinks 0.023     Low Low
cufflinks 1.469        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.045     Low  
cufflinks 1.443        
cufflinks 0.02     Low Low

0 Strain