Gene : Medtr2g005240 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR31384:SF28 - AUXIN RESPONSE FACTOR 1 Description:  auxin response factor 2
Genomic Order:  8 Name:  ? Medtr2g005240
Secondary Identifier:  ? PAC:31066513
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g005240 0.5kb upstream 0.5kb upstream 10921 true chr2: 92411-103331 Medicago truncatula
Medtr2g005240 0.5kb upstream 0.5kb upstream 500 false chr2: 92411-92910 Medicago truncatula
Medtr2g005240 0.5kb downstream 0.5kb downstream 10921 true chr2: 92911-103831 Medicago truncatula
Medtr2g005240 0.5kb downstream 0.5kb downstream 500 false chr2: 103332-103831 Medicago truncatula
Medtr2g005240 1.0kb upstream 1.0kb upstream 11421 true chr2: 91911-103331 Medicago truncatula
Medtr2g005240 1.0kb upstream 1.0kb upstream 1000 false chr2: 91911-92910 Medicago truncatula
Medtr2g005240 1.0kb downstream 1.0kb downstream 11421 true chr2: 92911-104331 Medicago truncatula
Medtr2g005240 1.0kb downstream 1.0kb downstream 1000 false chr2: 103332-104331 Medicago truncatula
Medtr2g005240 2.0kb upstream 2.0kb upstream 12421 true chr2: 90911-103331 Medicago truncatula
Medtr2g005240 2.0kb upstream 2.0kb upstream 2000 false chr2: 90911-92910 Medicago truncatula
Medtr2g005240 2.0kb downstream 2.0kb downstream 12421 true chr2: 92911-105331 Medicago truncatula
Medtr2g005240 2.0kb downstream 2.0kb downstream 2000 false chr2: 103332-105331 Medicago truncatula
Medtr2g005240 5.0kb upstream 5.0kb upstream 15421 true chr2: 87911-103331 Medicago truncatula
Medtr2g005240 5.0kb upstream 5.0kb upstream 5000 false chr2: 87911-92910 Medicago truncatula
Medtr2g005240 5.0kb downstream 5.0kb downstream 15421 true chr2: 92911-108331 Medicago truncatula
Medtr2g005240 5.0kb downstream 5.0kb downstream 5000 false chr2: 103332-108331 Medicago truncatula
Medtr2g005240 10.0kb upstream 10.0kb upstream 20421 true chr2: 82911-103331 Medicago truncatula
Medtr2g005240 10.0kb upstream 10.0kb upstream 10000 false chr2: 82911-92910 Medicago truncatula
Medtr2g005240 10.0kb downstream 10.0kb downstream 20421 true chr2: 92911-113331 Medicago truncatula
Medtr2g005240 10.0kb downstream 10.0kb downstream 10000 false chr2: 103332-113331 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300985 5265 Fabidae View MSA
124069092 5270 Rosid View MSA
123739292 5271 Pentapetalae View MSA
122788624 5272 Eudicot View MSA
122050868 5273 Angiosperm View MSA
121348224 5274 Embryophyte View MSA
123380779 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.286        
cufflinks 8.466        
cufflinks 10.709     High  
cufflinks 6.884        
cufflinks 9.915        
cufflinks 1.733       Low
cufflinks 6.463        
cufflinks 9.204     High  
cufflinks 7.665        

0 Strain