Gene : Medtr2g005820 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR22880:SF174 - DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN Description:  bromodomain protein
Genomic Order:  41 Name:  ? Medtr2g005820
Secondary Identifier:  ? PAC:31065262
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g005820 0.5kb upstream 0.5kb upstream 5198 true chr2: 325436-330633 Medicago truncatula
Medtr2g005820 0.5kb upstream 0.5kb upstream 500 false chr2: 325436-325935 Medicago truncatula
Medtr2g005820 0.5kb downstream 0.5kb downstream 5198 true chr2: 325936-331133 Medicago truncatula
Medtr2g005820 0.5kb downstream 0.5kb downstream 500 false chr2: 330634-331133 Medicago truncatula
Medtr2g005820 1.0kb upstream 1.0kb upstream 5698 true chr2: 324936-330633 Medicago truncatula
Medtr2g005820 1.0kb upstream 1.0kb upstream 1000 false chr2: 324936-325935 Medicago truncatula
Medtr2g005820 1.0kb downstream 1.0kb downstream 5698 true chr2: 325936-331633 Medicago truncatula
Medtr2g005820 1.0kb downstream 1.0kb downstream 1000 false chr2: 330634-331633 Medicago truncatula
Medtr2g005820 2.0kb upstream 2.0kb upstream 6698 true chr2: 323936-330633 Medicago truncatula
Medtr2g005820 2.0kb upstream 2.0kb upstream 2000 false chr2: 323936-325935 Medicago truncatula
Medtr2g005820 2.0kb downstream 2.0kb downstream 6698 true chr2: 325936-332633 Medicago truncatula
Medtr2g005820 2.0kb downstream 2.0kb downstream 2000 false chr2: 330634-332633 Medicago truncatula
Medtr2g005820 5.0kb upstream 5.0kb upstream 9698 true chr2: 320936-330633 Medicago truncatula
Medtr2g005820 5.0kb upstream 5.0kb upstream 5000 false chr2: 320936-325935 Medicago truncatula
Medtr2g005820 5.0kb downstream 5.0kb downstream 9698 true chr2: 325936-335633 Medicago truncatula
Medtr2g005820 5.0kb downstream 5.0kb downstream 5000 false chr2: 330634-335633 Medicago truncatula
Medtr2g005820 10.0kb upstream 10.0kb upstream 14698 true chr2: 315936-330633 Medicago truncatula
Medtr2g005820 10.0kb upstream 10.0kb upstream 10000 false chr2: 315936-325935 Medicago truncatula
Medtr2g005820 10.0kb downstream 10.0kb downstream 14698 true chr2: 325936-340633 Medicago truncatula
Medtr2g005820 10.0kb downstream 10.0kb downstream 10000 false chr2: 330634-340633 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304371 5265 Fabidae View MSA
124069417 5270 Rosid View MSA
123752980 5271 Pentapetalae View MSA
122795275 5272 Eudicot View MSA
122044114 5273 Angiosperm View MSA
123429103 5275 Viridiplantae View MSA
121348064 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.015        
cufflinks 4.299        
cufflinks 4.934        
cufflinks 2.202       Low
cufflinks 5.168       High
cufflinks 1.516       Low
cufflinks 2.649        
cufflinks 4.396        
cufflinks 3.005        

0 Strain