Gene : Medtr2g007780 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR21141:SF37 - MRNA TURNOVER PROTEIN 4 HOMOLOG Description:  ribosomal protein L10 family protein
Genomic Order:  159 Name:  ? Medtr2g007780
Secondary Identifier:  ? PAC:31067869
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g007780 0.5kb upstream 0.5kb upstream 3456 true chr2: 1118204-1121659 Medicago truncatula
Medtr2g007780 0.5kb upstream 0.5kb upstream 500 false chr2: 1121160-1121659 Medicago truncatula
Medtr2g007780 0.5kb downstream 0.5kb downstream 3456 true chr2: 1117704-1121159 Medicago truncatula
Medtr2g007780 0.5kb downstream 0.5kb downstream 500 false chr2: 1117704-1118203 Medicago truncatula
Medtr2g007780 1.0kb upstream 1.0kb upstream 3956 true chr2: 1118204-1122159 Medicago truncatula
Medtr2g007780 1.0kb upstream 1.0kb upstream 1000 false chr2: 1121160-1122159 Medicago truncatula
Medtr2g007780 1.0kb downstream 1.0kb downstream 3956 true chr2: 1117204-1121159 Medicago truncatula
Medtr2g007780 1.0kb downstream 1.0kb downstream 1000 false chr2: 1117204-1118203 Medicago truncatula
Medtr2g007780 2.0kb upstream 2.0kb upstream 4956 true chr2: 1118204-1123159 Medicago truncatula
Medtr2g007780 2.0kb upstream 2.0kb upstream 2000 false chr2: 1121160-1123159 Medicago truncatula
Medtr2g007780 2.0kb downstream 2.0kb downstream 4956 true chr2: 1116204-1121159 Medicago truncatula
Medtr2g007780 2.0kb downstream 2.0kb downstream 2000 false chr2: 1116204-1118203 Medicago truncatula
Medtr2g007780 5.0kb upstream 5.0kb upstream 7956 true chr2: 1118204-1126159 Medicago truncatula
Medtr2g007780 5.0kb upstream 5.0kb upstream 5000 false chr2: 1121160-1126159 Medicago truncatula
Medtr2g007780 5.0kb downstream 5.0kb downstream 7956 true chr2: 1113204-1121159 Medicago truncatula
Medtr2g007780 5.0kb downstream 5.0kb downstream 5000 false chr2: 1113204-1118203 Medicago truncatula
Medtr2g007780 10.0kb upstream 10.0kb upstream 12956 true chr2: 1118204-1131159 Medicago truncatula
Medtr2g007780 10.0kb upstream 10.0kb upstream 10000 false chr2: 1121160-1131159 Medicago truncatula
Medtr2g007780 10.0kb downstream 10.0kb downstream 12956 true chr2: 1108204-1121159 Medicago truncatula
Medtr2g007780 10.0kb downstream 10.0kb downstream 10000 false chr2: 1108204-1118203 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302322 5265 Fabidae View MSA
124062070 5270 Rosid View MSA
123743293 5271 Pentapetalae View MSA
122790170 5272 Eudicot View MSA
122047939 5273 Angiosperm View MSA
121346262 5274 Embryophyte View MSA
123423929 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.426        
cufflinks 7.548        
cufflinks 7.265        
cufflinks 4.407        
cufflinks 17.641     High High
cufflinks 1.866       Low
cufflinks 5.497        
cufflinks 7.21        
cufflinks 6.155        

0 Strain