Gene : Medtr1g111540 M. truncatula Mt4.0v1
Defline:  (1 of 7) PTHR21576//PTHR21576:SF40 - UNCHARACTERIZED NODULIN-LIKE PROTEIN Description:  MFS transporter
Genomic Order:  6349 Name:  ? Medtr1g111540
Secondary Identifier:  ? PAC:31093528
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g111540 0.5kb upstream 0.5kb upstream 2758 true chr1: 50392205-50394962 Medicago truncatula
Medtr1g111540 0.5kb upstream 0.5kb upstream 500 false chr1: 50392205-50392704 Medicago truncatula
Medtr1g111540 0.5kb downstream 0.5kb downstream 2758 true chr1: 50392705-50395462 Medicago truncatula
Medtr1g111540 0.5kb downstream 0.5kb downstream 500 false chr1: 50394963-50395462 Medicago truncatula
Medtr1g111540 1.0kb upstream 1.0kb upstream 3258 true chr1: 50391705-50394962 Medicago truncatula
Medtr1g111540 1.0kb upstream 1.0kb upstream 1000 false chr1: 50391705-50392704 Medicago truncatula
Medtr1g111540 1.0kb downstream 1.0kb downstream 3258 true chr1: 50392705-50395962 Medicago truncatula
Medtr1g111540 1.0kb downstream 1.0kb downstream 1000 false chr1: 50394963-50395962 Medicago truncatula
Medtr1g111540 2.0kb upstream 2.0kb upstream 4258 true chr1: 50390705-50394962 Medicago truncatula
Medtr1g111540 2.0kb upstream 2.0kb upstream 2000 false chr1: 50390705-50392704 Medicago truncatula
Medtr1g111540 2.0kb downstream 2.0kb downstream 4258 true chr1: 50392705-50396962 Medicago truncatula
Medtr1g111540 2.0kb downstream 2.0kb downstream 2000 false chr1: 50394963-50396962 Medicago truncatula
Medtr1g111540 5.0kb upstream 5.0kb upstream 7258 true chr1: 50387705-50394962 Medicago truncatula
Medtr1g111540 5.0kb upstream 5.0kb upstream 5000 false chr1: 50387705-50392704 Medicago truncatula
Medtr1g111540 5.0kb downstream 5.0kb downstream 7258 true chr1: 50392705-50399962 Medicago truncatula
Medtr1g111540 5.0kb downstream 5.0kb downstream 5000 false chr1: 50394963-50399962 Medicago truncatula
Medtr1g111540 10.0kb upstream 10.0kb upstream 12258 true chr1: 50382705-50394962 Medicago truncatula
Medtr1g111540 10.0kb upstream 10.0kb upstream 10000 false chr1: 50382705-50392704 Medicago truncatula
Medtr1g111540 10.0kb downstream 10.0kb downstream 12258 true chr1: 50392705-50404962 Medicago truncatula
Medtr1g111540 10.0kb downstream 10.0kb downstream 10000 false chr1: 50394963-50404962 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302973 5265 Fabidae View MSA
124070217 5270 Rosid View MSA
123751158 5271 Pentapetalae View MSA
122794287 5272 Eudicot View MSA
122046901 5273 Angiosperm View MSA
123429121 5275 Viridiplantae View MSA
121350674 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.069       Low
cufflinks 18.528     High  
cufflinks 28.303     High High
cufflinks 2.088       Low
cufflinks 17.779     High  
cufflinks 4.042        
cufflinks 6.844        
cufflinks 26.517     High High
cufflinks 6.761        

0 Strain