Gene : Medtr1g114150 M. truncatula Mt4.0v1
Defline:  (1 of 7) PF02373//PF10497 - JmjC domain, hydroxylase (JmjC) // Zinc-finger domain of monoamine-oxidase A repressor R1 (zf-4CXXC_R1) Description:  transcription factor jumonji (JmjC) domain protein
Genomic Order:  6488 Name:  ? Medtr1g114150
Secondary Identifier:  ? PAC:31099073
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g114150 0.5kb upstream 0.5kb upstream 13797 true chr1: 51494610-51508406 Medicago truncatula
Medtr1g114150 0.5kb upstream 0.5kb upstream 500 false chr1: 51494610-51495109 Medicago truncatula
Medtr1g114150 0.5kb downstream 0.5kb downstream 13797 true chr1: 51495110-51508906 Medicago truncatula
Medtr1g114150 0.5kb downstream 0.5kb downstream 500 false chr1: 51508407-51508906 Medicago truncatula
Medtr1g114150 1.0kb upstream 1.0kb upstream 14297 true chr1: 51494110-51508406 Medicago truncatula
Medtr1g114150 1.0kb upstream 1.0kb upstream 1000 false chr1: 51494110-51495109 Medicago truncatula
Medtr1g114150 1.0kb downstream 1.0kb downstream 14297 true chr1: 51495110-51509406 Medicago truncatula
Medtr1g114150 1.0kb downstream 1.0kb downstream 1000 false chr1: 51508407-51509406 Medicago truncatula
Medtr1g114150 2.0kb upstream 2.0kb upstream 15297 true chr1: 51493110-51508406 Medicago truncatula
Medtr1g114150 2.0kb upstream 2.0kb upstream 2000 false chr1: 51493110-51495109 Medicago truncatula
Medtr1g114150 2.0kb downstream 2.0kb downstream 15297 true chr1: 51495110-51510406 Medicago truncatula
Medtr1g114150 2.0kb downstream 2.0kb downstream 2000 false chr1: 51508407-51510406 Medicago truncatula
Medtr1g114150 5.0kb upstream 5.0kb upstream 18297 true chr1: 51490110-51508406 Medicago truncatula
Medtr1g114150 5.0kb upstream 5.0kb upstream 5000 false chr1: 51490110-51495109 Medicago truncatula
Medtr1g114150 5.0kb downstream 5.0kb downstream 18297 true chr1: 51495110-51513406 Medicago truncatula
Medtr1g114150 5.0kb downstream 5.0kb downstream 5000 false chr1: 51508407-51513406 Medicago truncatula
Medtr1g114150 10.0kb upstream 10.0kb upstream 23297 true chr1: 51485110-51508406 Medicago truncatula
Medtr1g114150 10.0kb upstream 10.0kb upstream 10000 false chr1: 51485110-51495109 Medicago truncatula
Medtr1g114150 10.0kb downstream 10.0kb downstream 23297 true chr1: 51495110-51518406 Medicago truncatula
Medtr1g114150 10.0kb downstream 10.0kb downstream 10000 false chr1: 51508407-51518406 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314720 5265 Fabidae View MSA
124073545 5270 Rosid View MSA
123747808 5271 Pentapetalae View MSA
122796242 5272 Eudicot View MSA
122050393 5273 Angiosperm View MSA
121349542 5274 Embryophyte View MSA
123425923 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.204       High
cufflinks 1.73        
cufflinks 1.542        
cufflinks 0.492       Low
cufflinks 1.69        
cufflinks 0.425       Low
cufflinks 1.542        
cufflinks 1.539        
cufflinks 1.068        

0 Strain