Gene : Medtr1g115440 M. truncatula Mt4.0v1
Defline:  (1 of 69) PF05056 - Protein of unknown function (DUF674) (DUF674) Description:  DUF674 family protein
Genomic Order:  6583 Name:  ? Medtr1g115440
Secondary Identifier:  ? PAC:31095940
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g115440 0.5kb upstream 0.5kb upstream 1394 true chr1: 52133151-52134544 Medicago truncatula
Medtr1g115440 0.5kb upstream 0.5kb upstream 500 false chr1: 52134045-52134544 Medicago truncatula
Medtr1g115440 0.5kb downstream 0.5kb downstream 1394 true chr1: 52132651-52134044 Medicago truncatula
Medtr1g115440 0.5kb downstream 0.5kb downstream 500 false chr1: 52132651-52133150 Medicago truncatula
Medtr1g115440 1.0kb upstream 1.0kb upstream 1894 true chr1: 52133151-52135044 Medicago truncatula
Medtr1g115440 1.0kb upstream 1.0kb upstream 1000 false chr1: 52134045-52135044 Medicago truncatula
Medtr1g115440 1.0kb downstream 1.0kb downstream 1894 true chr1: 52132151-52134044 Medicago truncatula
Medtr1g115440 1.0kb downstream 1.0kb downstream 1000 false chr1: 52132151-52133150 Medicago truncatula
Medtr1g115440 2.0kb upstream 2.0kb upstream 2894 true chr1: 52133151-52136044 Medicago truncatula
Medtr1g115440 2.0kb upstream 2.0kb upstream 2000 false chr1: 52134045-52136044 Medicago truncatula
Medtr1g115440 2.0kb downstream 2.0kb downstream 2894 true chr1: 52131151-52134044 Medicago truncatula
Medtr1g115440 2.0kb downstream 2.0kb downstream 2000 false chr1: 52131151-52133150 Medicago truncatula
Medtr1g115440 5.0kb upstream 5.0kb upstream 5894 true chr1: 52133151-52139044 Medicago truncatula
Medtr1g115440 5.0kb upstream 5.0kb upstream 5000 false chr1: 52134045-52139044 Medicago truncatula
Medtr1g115440 5.0kb downstream 5.0kb downstream 5894 true chr1: 52128151-52134044 Medicago truncatula
Medtr1g115440 5.0kb downstream 5.0kb downstream 5000 false chr1: 52128151-52133150 Medicago truncatula
Medtr1g115440 10.0kb upstream 10.0kb upstream 10894 true chr1: 52133151-52144044 Medicago truncatula
Medtr1g115440 10.0kb upstream 10.0kb upstream 10000 false chr1: 52134045-52144044 Medicago truncatula
Medtr1g115440 10.0kb downstream 10.0kb downstream 10894 true chr1: 52123151-52134044 Medicago truncatula
Medtr1g115440 10.0kb downstream 10.0kb downstream 10000 false chr1: 52123151-52133150 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029295 5273 Angiosperm View MSA
122313781 5265 Fabidae View MSA
124073247 5270 Rosid View MSA
123752528 5271 Pentapetalae View MSA
122797868 5272 Eudicot View MSA
121350471 5274 Embryophyte View MSA
123381749 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.529       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.017     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.028     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.015     Low  
cufflinks 0.031     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain