Gene : Medtr1g115535 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11614:SF92 - ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN-RELATED Description:  alpha/beta fold hydrolase
Genomic Order:  6598 Name:  ? Medtr1g115535
Secondary Identifier:  ? PAC:31095245
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-7420 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g115535 0.5kb upstream 0.5kb upstream 4889 true chr1: 52215897-52220785 Medicago truncatula
Medtr1g115535 0.5kb upstream 0.5kb upstream 500 false chr1: 52220286-52220785 Medicago truncatula
Medtr1g115535 0.5kb downstream 0.5kb downstream 4889 true chr1: 52215397-52220285 Medicago truncatula
Medtr1g115535 0.5kb downstream 0.5kb downstream 500 false chr1: 52215397-52215896 Medicago truncatula
Medtr1g115535 1.0kb upstream 1.0kb upstream 5389 true chr1: 52215897-52221285 Medicago truncatula
Medtr1g115535 1.0kb upstream 1.0kb upstream 1000 false chr1: 52220286-52221285 Medicago truncatula
Medtr1g115535 1.0kb downstream 1.0kb downstream 5389 true chr1: 52214897-52220285 Medicago truncatula
Medtr1g115535 1.0kb downstream 1.0kb downstream 1000 false chr1: 52214897-52215896 Medicago truncatula
Medtr1g115535 2.0kb upstream 2.0kb upstream 6389 true chr1: 52215897-52222285 Medicago truncatula
Medtr1g115535 2.0kb upstream 2.0kb upstream 2000 false chr1: 52220286-52222285 Medicago truncatula
Medtr1g115535 2.0kb downstream 2.0kb downstream 6389 true chr1: 52213897-52220285 Medicago truncatula
Medtr1g115535 2.0kb downstream 2.0kb downstream 2000 false chr1: 52213897-52215896 Medicago truncatula
Medtr1g115535 5.0kb upstream 5.0kb upstream 9389 true chr1: 52215897-52225285 Medicago truncatula
Medtr1g115535 5.0kb upstream 5.0kb upstream 5000 false chr1: 52220286-52225285 Medicago truncatula
Medtr1g115535 5.0kb downstream 5.0kb downstream 9389 true chr1: 52210897-52220285 Medicago truncatula
Medtr1g115535 5.0kb downstream 5.0kb downstream 5000 false chr1: 52210897-52215896 Medicago truncatula
Medtr1g115535 10.0kb upstream 10.0kb upstream 14389 true chr1: 52215897-52230285 Medicago truncatula
Medtr1g115535 10.0kb upstream 10.0kb upstream 10000 false chr1: 52220286-52230285 Medicago truncatula
Medtr1g115535 10.0kb downstream 10.0kb downstream 14389 true chr1: 52205897-52220285 Medicago truncatula
Medtr1g115535 10.0kb downstream 10.0kb downstream 10000 false chr1: 52205897-52215896 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302200 5265 Fabidae View MSA
124061404 5270 Rosid View MSA
123753493 5271 Pentapetalae View MSA
122796454 5272 Eudicot View MSA
122051494 5273 Angiosperm View MSA
121350082 5274 Embryophyte View MSA
123428617 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 36.755     High High
cufflinks 7.378        
cufflinks 24.205     High High
cufflinks 3.306       Low
cufflinks 5.899        
cufflinks 9.917        
cufflinks 16.098     High  
cufflinks 11.717     High  
cufflinks 12.674     High  

0 Strain