Gene : Medtr1g116280 M. truncatula Mt4.0v1
Defline:  (1 of 2) 2.7.8.5 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase / Phosphatidylglycerophosphate synthase Description:  phosphatidylglycerolphosphate synthase
Genomic Order:  6656 Name:  ? Medtr1g116280
Secondary Identifier:  ? PAC:31098005
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY4FS-7 Medicago truncatula pathologic  
Mtruncatula PWY-5269 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g116280 0.5kb upstream 0.5kb upstream 3872 true chr1: 52559829-52563700 Medicago truncatula
Medtr1g116280 0.5kb upstream 0.5kb upstream 500 false chr1: 52563201-52563700 Medicago truncatula
Medtr1g116280 0.5kb downstream 0.5kb downstream 3872 true chr1: 52559329-52563200 Medicago truncatula
Medtr1g116280 0.5kb downstream 0.5kb downstream 500 false chr1: 52559329-52559828 Medicago truncatula
Medtr1g116280 1.0kb upstream 1.0kb upstream 4372 true chr1: 52559829-52564200 Medicago truncatula
Medtr1g116280 1.0kb upstream 1.0kb upstream 1000 false chr1: 52563201-52564200 Medicago truncatula
Medtr1g116280 1.0kb downstream 1.0kb downstream 4372 true chr1: 52558829-52563200 Medicago truncatula
Medtr1g116280 1.0kb downstream 1.0kb downstream 1000 false chr1: 52558829-52559828 Medicago truncatula
Medtr1g116280 2.0kb upstream 2.0kb upstream 5372 true chr1: 52559829-52565200 Medicago truncatula
Medtr1g116280 2.0kb upstream 2.0kb upstream 2000 false chr1: 52563201-52565200 Medicago truncatula
Medtr1g116280 2.0kb downstream 2.0kb downstream 5372 true chr1: 52557829-52563200 Medicago truncatula
Medtr1g116280 2.0kb downstream 2.0kb downstream 2000 false chr1: 52557829-52559828 Medicago truncatula
Medtr1g116280 5.0kb upstream 5.0kb upstream 8372 true chr1: 52559829-52568200 Medicago truncatula
Medtr1g116280 5.0kb upstream 5.0kb upstream 5000 false chr1: 52563201-52568200 Medicago truncatula
Medtr1g116280 5.0kb downstream 5.0kb downstream 8372 true chr1: 52554829-52563200 Medicago truncatula
Medtr1g116280 5.0kb downstream 5.0kb downstream 5000 false chr1: 52554829-52559828 Medicago truncatula
Medtr1g116280 10.0kb upstream 10.0kb upstream 13372 true chr1: 52559829-52573200 Medicago truncatula
Medtr1g116280 10.0kb upstream 10.0kb upstream 10000 false chr1: 52563201-52573200 Medicago truncatula
Medtr1g116280 10.0kb downstream 10.0kb downstream 13372 true chr1: 52549829-52563200 Medicago truncatula
Medtr1g116280 10.0kb downstream 10.0kb downstream 10000 false chr1: 52549829-52559828 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041214 5273 Angiosperm View MSA
122314106 5265 Fabidae View MSA
124064050 5270 Rosid View MSA
123750355 5271 Pentapetalae View MSA
122791473 5272 Eudicot View MSA
121349383 5274 Embryophyte View MSA
123424626 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.042       Low
cufflinks 2.191        
cufflinks 2.806        
cufflinks 2.525        
cufflinks 2.318        
cufflinks 2.176        
cufflinks 0.818       Low
cufflinks 2.345        
cufflinks 1.005       Low

0 Strain