Gene : Medtr2g043900 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11972:SF44 - RESPIRATORY BURST OXIDASE HOMOLOG PROTEIN E Description:  respiratory burst oxidase-like protein
Genomic Order:  2621 Name:  ? Medtr2g043900
Secondary Identifier:  ? PAC:31064275
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g043900 0.5kb upstream 0.5kb upstream 8648 true chr2: 19068321-19076968 Medicago truncatula
Medtr2g043900 0.5kb upstream 0.5kb upstream 500 false chr2: 19076469-19076968 Medicago truncatula
Medtr2g043900 0.5kb downstream 0.5kb downstream 8648 true chr2: 19067821-19076468 Medicago truncatula
Medtr2g043900 0.5kb downstream 0.5kb downstream 500 false chr2: 19067821-19068320 Medicago truncatula
Medtr2g043900 1.0kb upstream 1.0kb upstream 9148 true chr2: 19068321-19077468 Medicago truncatula
Medtr2g043900 1.0kb upstream 1.0kb upstream 1000 false chr2: 19076469-19077468 Medicago truncatula
Medtr2g043900 1.0kb downstream 1.0kb downstream 9148 true chr2: 19067321-19076468 Medicago truncatula
Medtr2g043900 1.0kb downstream 1.0kb downstream 1000 false chr2: 19067321-19068320 Medicago truncatula
Medtr2g043900 2.0kb upstream 2.0kb upstream 10148 true chr2: 19068321-19078468 Medicago truncatula
Medtr2g043900 2.0kb upstream 2.0kb upstream 2000 false chr2: 19076469-19078468 Medicago truncatula
Medtr2g043900 2.0kb downstream 2.0kb downstream 10148 true chr2: 19066321-19076468 Medicago truncatula
Medtr2g043900 2.0kb downstream 2.0kb downstream 2000 false chr2: 19066321-19068320 Medicago truncatula
Medtr2g043900 5.0kb upstream 5.0kb upstream 13148 true chr2: 19068321-19081468 Medicago truncatula
Medtr2g043900 5.0kb upstream 5.0kb upstream 5000 false chr2: 19076469-19081468 Medicago truncatula
Medtr2g043900 5.0kb downstream 5.0kb downstream 13148 true chr2: 19063321-19076468 Medicago truncatula
Medtr2g043900 5.0kb downstream 5.0kb downstream 5000 false chr2: 19063321-19068320 Medicago truncatula
Medtr2g043900 10.0kb upstream 10.0kb upstream 18148 true chr2: 19068321-19086468 Medicago truncatula
Medtr2g043900 10.0kb upstream 10.0kb upstream 10000 false chr2: 19076469-19086468 Medicago truncatula
Medtr2g043900 10.0kb downstream 10.0kb downstream 18148 true chr2: 19058321-19076468 Medicago truncatula
Medtr2g043900 10.0kb downstream 10.0kb downstream 10000 false chr2: 19058321-19068320 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299092 5265 Fabidae View MSA
124066412 5270 Rosid View MSA
123737833 5271 Pentapetalae View MSA
122791014 5272 Eudicot View MSA
122049816 5273 Angiosperm View MSA
121350202 5274 Embryophyte View MSA
123427915 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.102        
cufflinks 0.095        
cufflinks 0.052     Low  
cufflinks 0.026     Low  
cufflinks 0.147       High
cufflinks 0.009     Low Low
cufflinks 0.092        
cufflinks 0.06     Low  
cufflinks 0.084     Low  

0 Strain