Gene : Medtr2g043380 M. truncatula Mt4.0v1
Defline:  (1 of 1) PF00059 - Lectin C-type domain (Lectin_C) Description:  C-type lectin receptor-like tyrosine-kinase plant
Genomic Order:  2596 Name:  ? Medtr2g043380
Secondary Identifier:  ? PAC:31066779
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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g043380 0.5kb upstream 0.5kb upstream 7580 true chr2: 18896619-18904198 Medicago truncatula
Medtr2g043380 0.5kb upstream 0.5kb upstream 500 false chr2: 18903699-18904198 Medicago truncatula
Medtr2g043380 0.5kb downstream 0.5kb downstream 7580 true chr2: 18896119-18903698 Medicago truncatula
Medtr2g043380 0.5kb downstream 0.5kb downstream 500 false chr2: 18896119-18896618 Medicago truncatula
Medtr2g043380 1.0kb upstream 1.0kb upstream 8080 true chr2: 18896619-18904698 Medicago truncatula
Medtr2g043380 1.0kb upstream 1.0kb upstream 1000 false chr2: 18903699-18904698 Medicago truncatula
Medtr2g043380 1.0kb downstream 1.0kb downstream 8080 true chr2: 18895619-18903698 Medicago truncatula
Medtr2g043380 1.0kb downstream 1.0kb downstream 1000 false chr2: 18895619-18896618 Medicago truncatula
Medtr2g043380 2.0kb upstream 2.0kb upstream 9080 true chr2: 18896619-18905698 Medicago truncatula
Medtr2g043380 2.0kb upstream 2.0kb upstream 2000 false chr2: 18903699-18905698 Medicago truncatula
Medtr2g043380 2.0kb downstream 2.0kb downstream 9080 true chr2: 18894619-18903698 Medicago truncatula
Medtr2g043380 2.0kb downstream 2.0kb downstream 2000 false chr2: 18894619-18896618 Medicago truncatula
Medtr2g043380 5.0kb upstream 5.0kb upstream 12080 true chr2: 18896619-18908698 Medicago truncatula
Medtr2g043380 5.0kb upstream 5.0kb upstream 5000 false chr2: 18903699-18908698 Medicago truncatula
Medtr2g043380 5.0kb downstream 5.0kb downstream 12080 true chr2: 18891619-18903698 Medicago truncatula
Medtr2g043380 5.0kb downstream 5.0kb downstream 5000 false chr2: 18891619-18896618 Medicago truncatula
Medtr2g043380 10.0kb upstream 10.0kb upstream 17080 true chr2: 18896619-18913698 Medicago truncatula
Medtr2g043380 10.0kb upstream 10.0kb upstream 10000 false chr2: 18903699-18913698 Medicago truncatula
Medtr2g043380 10.0kb downstream 10.0kb downstream 17080 true chr2: 18886619-18903698 Medicago truncatula
Medtr2g043380 10.0kb downstream 10.0kb downstream 10000 false chr2: 18886619-18896618 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308117 5265 Fabidae View MSA
124063336 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.214        
cufflinks 1.617        
cufflinks 1.578        
cufflinks 0.872        
cufflinks 2.042       High
cufflinks 0.504       Low
cufflinks 1.297        
cufflinks 1.414        
cufflinks 0.848        

0 Strain