Gene : Medtr2g043530 M. truncatula Mt4.0v1
Defline:  (1 of 2) 2.3.1.179 - Beta-ketoacyl-[acyl-carrier-protein] synthase II / KASII Description:  3-oxoacyl-(acyl carrier) synthase II
Genomic Order:  2604 Name:  ? Medtr2g043530
Secondary Identifier:  ? PAC:31062845
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5973 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g043530 0.5kb upstream 0.5kb upstream 10798 true chr2: 18952130-18962927 Medicago truncatula
Medtr2g043530 0.5kb upstream 0.5kb upstream 500 false chr2: 18952130-18952629 Medicago truncatula
Medtr2g043530 0.5kb downstream 0.5kb downstream 10798 true chr2: 18952630-18963427 Medicago truncatula
Medtr2g043530 0.5kb downstream 0.5kb downstream 500 false chr2: 18962928-18963427 Medicago truncatula
Medtr2g043530 1.0kb upstream 1.0kb upstream 11298 true chr2: 18951630-18962927 Medicago truncatula
Medtr2g043530 1.0kb upstream 1.0kb upstream 1000 false chr2: 18951630-18952629 Medicago truncatula
Medtr2g043530 1.0kb downstream 1.0kb downstream 11298 true chr2: 18952630-18963927 Medicago truncatula
Medtr2g043530 1.0kb downstream 1.0kb downstream 1000 false chr2: 18962928-18963927 Medicago truncatula
Medtr2g043530 2.0kb upstream 2.0kb upstream 12298 true chr2: 18950630-18962927 Medicago truncatula
Medtr2g043530 2.0kb upstream 2.0kb upstream 2000 false chr2: 18950630-18952629 Medicago truncatula
Medtr2g043530 2.0kb downstream 2.0kb downstream 12298 true chr2: 18952630-18964927 Medicago truncatula
Medtr2g043530 2.0kb downstream 2.0kb downstream 2000 false chr2: 18962928-18964927 Medicago truncatula
Medtr2g043530 5.0kb upstream 5.0kb upstream 15298 true chr2: 18947630-18962927 Medicago truncatula
Medtr2g043530 5.0kb upstream 5.0kb upstream 5000 false chr2: 18947630-18952629 Medicago truncatula
Medtr2g043530 5.0kb downstream 5.0kb downstream 15298 true chr2: 18952630-18967927 Medicago truncatula
Medtr2g043530 5.0kb downstream 5.0kb downstream 5000 false chr2: 18962928-18967927 Medicago truncatula
Medtr2g043530 10.0kb upstream 10.0kb upstream 20298 true chr2: 18942630-18962927 Medicago truncatula
Medtr2g043530 10.0kb upstream 10.0kb upstream 10000 false chr2: 18942630-18952629 Medicago truncatula
Medtr2g043530 10.0kb downstream 10.0kb downstream 20298 true chr2: 18952630-18972927 Medicago truncatula
Medtr2g043530 10.0kb downstream 10.0kb downstream 10000 false chr2: 18962928-18972927 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311031 5265 Fabidae View MSA
124071420 5270 Rosid View MSA
123738483 5271 Pentapetalae View MSA
122792751 5272 Eudicot View MSA
122051170 5273 Angiosperm View MSA
121345587 5274 Embryophyte View MSA
123424058 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.49        
cufflinks 1.595        
cufflinks 1.118        
cufflinks 0.245        
cufflinks 1.946       High
cufflinks 0.036     Low Low
cufflinks 0.248        
cufflinks 1.184        
cufflinks 0.364        

0 Strain