Gene : Medtr2g046160 M. truncatula Mt4.0v1
Defline:  (1 of 1) KOG4495 - RNA polymerase II transcription elongation factor Elongin/SIII, subunit elongin B Description:  ubiquitin family protein
Genomic Order:  2734 Name:  ? Medtr2g046160
Secondary Identifier:  ? PAC:31066895
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g046160 0.5kb upstream 0.5kb upstream 3798 true chr2: 20240118-20243915 Medicago truncatula
Medtr2g046160 0.5kb upstream 0.5kb upstream 500 false chr2: 20243416-20243915 Medicago truncatula
Medtr2g046160 0.5kb downstream 0.5kb downstream 3798 true chr2: 20239618-20243415 Medicago truncatula
Medtr2g046160 0.5kb downstream 0.5kb downstream 500 false chr2: 20239618-20240117 Medicago truncatula
Medtr2g046160 1.0kb upstream 1.0kb upstream 4298 true chr2: 20240118-20244415 Medicago truncatula
Medtr2g046160 1.0kb upstream 1.0kb upstream 1000 false chr2: 20243416-20244415 Medicago truncatula
Medtr2g046160 1.0kb downstream 1.0kb downstream 4298 true chr2: 20239118-20243415 Medicago truncatula
Medtr2g046160 1.0kb downstream 1.0kb downstream 1000 false chr2: 20239118-20240117 Medicago truncatula
Medtr2g046160 2.0kb upstream 2.0kb upstream 5298 true chr2: 20240118-20245415 Medicago truncatula
Medtr2g046160 2.0kb upstream 2.0kb upstream 2000 false chr2: 20243416-20245415 Medicago truncatula
Medtr2g046160 2.0kb downstream 2.0kb downstream 5298 true chr2: 20238118-20243415 Medicago truncatula
Medtr2g046160 2.0kb downstream 2.0kb downstream 2000 false chr2: 20238118-20240117 Medicago truncatula
Medtr2g046160 5.0kb upstream 5.0kb upstream 8298 true chr2: 20240118-20248415 Medicago truncatula
Medtr2g046160 5.0kb upstream 5.0kb upstream 5000 false chr2: 20243416-20248415 Medicago truncatula
Medtr2g046160 5.0kb downstream 5.0kb downstream 8298 true chr2: 20235118-20243415 Medicago truncatula
Medtr2g046160 5.0kb downstream 5.0kb downstream 5000 false chr2: 20235118-20240117 Medicago truncatula
Medtr2g046160 10.0kb upstream 10.0kb upstream 13298 true chr2: 20240118-20253415 Medicago truncatula
Medtr2g046160 10.0kb upstream 10.0kb upstream 10000 false chr2: 20243416-20253415 Medicago truncatula
Medtr2g046160 10.0kb downstream 10.0kb downstream 13298 true chr2: 20230118-20243415 Medicago truncatula
Medtr2g046160 10.0kb downstream 10.0kb downstream 10000 false chr2: 20230118-20240117 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041259 5273 Angiosperm View MSA
122299731 5265 Fabidae View MSA
124069900 5270 Rosid View MSA
123745453 5271 Pentapetalae View MSA
122793861 5272 Eudicot View MSA
121350685 5274 Embryophyte View MSA
123425021 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.154        
cufflinks 2.331        
cufflinks 2.064       Low
cufflinks 2.776        
cufflinks 2.4        
cufflinks 2.235        
cufflinks 3.486       High
cufflinks 1.932       Low
cufflinks 3.584       High

0 Strain