Gene : Medtr2g045080 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR12418:SF33 - 1,4-DIHYDROXY-2-NAPHTHOYL-COA THIOESTERASE 1 Description:  acyl-CoA thioesterase
Genomic Order:  2679 Name:  ? Medtr2g045080
Secondary Identifier:  ? PAC:31062677
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5837 Medicago truncatula pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g045080 0.5kb upstream 0.5kb upstream 2079 true chr2: 19612790-19614868 Medicago truncatula
Medtr2g045080 0.5kb upstream 0.5kb upstream 500 false chr2: 19612790-19613289 Medicago truncatula
Medtr2g045080 0.5kb downstream 0.5kb downstream 2079 true chr2: 19613290-19615368 Medicago truncatula
Medtr2g045080 0.5kb downstream 0.5kb downstream 500 false chr2: 19614869-19615368 Medicago truncatula
Medtr2g045080 1.0kb upstream 1.0kb upstream 2579 true chr2: 19612290-19614868 Medicago truncatula
Medtr2g045080 1.0kb upstream 1.0kb upstream 1000 false chr2: 19612290-19613289 Medicago truncatula
Medtr2g045080 1.0kb downstream 1.0kb downstream 2579 true chr2: 19613290-19615868 Medicago truncatula
Medtr2g045080 1.0kb downstream 1.0kb downstream 1000 false chr2: 19614869-19615868 Medicago truncatula
Medtr2g045080 2.0kb upstream 2.0kb upstream 3579 true chr2: 19611290-19614868 Medicago truncatula
Medtr2g045080 2.0kb upstream 2.0kb upstream 2000 false chr2: 19611290-19613289 Medicago truncatula
Medtr2g045080 2.0kb downstream 2.0kb downstream 3579 true chr2: 19613290-19616868 Medicago truncatula
Medtr2g045080 2.0kb downstream 2.0kb downstream 2000 false chr2: 19614869-19616868 Medicago truncatula
Medtr2g045080 5.0kb upstream 5.0kb upstream 6579 true chr2: 19608290-19614868 Medicago truncatula
Medtr2g045080 5.0kb upstream 5.0kb upstream 5000 false chr2: 19608290-19613289 Medicago truncatula
Medtr2g045080 5.0kb downstream 5.0kb downstream 6579 true chr2: 19613290-19619868 Medicago truncatula
Medtr2g045080 5.0kb downstream 5.0kb downstream 5000 false chr2: 19614869-19619868 Medicago truncatula
Medtr2g045080 10.0kb upstream 10.0kb upstream 11579 true chr2: 19603290-19614868 Medicago truncatula
Medtr2g045080 10.0kb upstream 10.0kb upstream 10000 false chr2: 19603290-19613289 Medicago truncatula
Medtr2g045080 10.0kb downstream 10.0kb downstream 11579 true chr2: 19613290-19624868 Medicago truncatula
Medtr2g045080 10.0kb downstream 10.0kb downstream 10000 false chr2: 19614869-19624868 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121783623 5273 Angiosperm View MSA
122257572 5265 Fabidae Singleton cluster - no MSA
124041496 5270 Rosid View MSA
123755301 5271 Pentapetalae View MSA
122776576 5272 Eudicot View MSA
121055071 5274 Embryophyte View MSA
123095018 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.732        
cufflinks 1.234       Low
cufflinks 1.665        
cufflinks 13.053     High  
cufflinks 2.852        
cufflinks 22.845     High High
cufflinks 25.111     High High
cufflinks 1.34       Low
cufflinks 28.476     High High

0 Strain