Gene : Medtr2g047130 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10694:SF41 - JUMONJI DOMAIN-CONTAINING PROTEIN 18-RELATED Description:  transcription factor jumonji family protein
Genomic Order:  2783 Name:  ? Medtr2g047130
Secondary Identifier:  ? PAC:31067992
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g047130 0.5kb upstream 0.5kb upstream 6224 true chr2: 20672347-20678570 Medicago truncatula
Medtr2g047130 0.5kb upstream 0.5kb upstream 500 false chr2: 20678071-20678570 Medicago truncatula
Medtr2g047130 0.5kb downstream 0.5kb downstream 6224 true chr2: 20671847-20678070 Medicago truncatula
Medtr2g047130 0.5kb downstream 0.5kb downstream 500 false chr2: 20671847-20672346 Medicago truncatula
Medtr2g047130 1.0kb upstream 1.0kb upstream 6724 true chr2: 20672347-20679070 Medicago truncatula
Medtr2g047130 1.0kb upstream 1.0kb upstream 1000 false chr2: 20678071-20679070 Medicago truncatula
Medtr2g047130 1.0kb downstream 1.0kb downstream 6724 true chr2: 20671347-20678070 Medicago truncatula
Medtr2g047130 1.0kb downstream 1.0kb downstream 1000 false chr2: 20671347-20672346 Medicago truncatula
Medtr2g047130 2.0kb upstream 2.0kb upstream 7724 true chr2: 20672347-20680070 Medicago truncatula
Medtr2g047130 2.0kb upstream 2.0kb upstream 2000 false chr2: 20678071-20680070 Medicago truncatula
Medtr2g047130 2.0kb downstream 2.0kb downstream 7724 true chr2: 20670347-20678070 Medicago truncatula
Medtr2g047130 2.0kb downstream 2.0kb downstream 2000 false chr2: 20670347-20672346 Medicago truncatula
Medtr2g047130 5.0kb upstream 5.0kb upstream 10724 true chr2: 20672347-20683070 Medicago truncatula
Medtr2g047130 5.0kb upstream 5.0kb upstream 5000 false chr2: 20678071-20683070 Medicago truncatula
Medtr2g047130 5.0kb downstream 5.0kb downstream 10724 true chr2: 20667347-20678070 Medicago truncatula
Medtr2g047130 5.0kb downstream 5.0kb downstream 5000 false chr2: 20667347-20672346 Medicago truncatula
Medtr2g047130 10.0kb upstream 10.0kb upstream 15724 true chr2: 20672347-20688070 Medicago truncatula
Medtr2g047130 10.0kb upstream 10.0kb upstream 10000 false chr2: 20678071-20688070 Medicago truncatula
Medtr2g047130 10.0kb downstream 10.0kb downstream 15724 true chr2: 20662347-20678070 Medicago truncatula
Medtr2g047130 10.0kb downstream 10.0kb downstream 10000 false chr2: 20662347-20672346 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314311 5265 Fabidae View MSA
124068572 5270 Rosid View MSA
123751211 5271 Pentapetalae View MSA
122797514 5272 Eudicot View MSA
122050637 5273 Angiosperm View MSA
123428928 5275 Viridiplantae View MSA
121350129 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.536     High High
cufflinks 1.096        
cufflinks 1.507        
cufflinks 1.147        
cufflinks 1.378        
cufflinks 0.825        
cufflinks 3.601        
cufflinks 1.335        
cufflinks 2.783        

0 Strain