Gene : Medtr2g049420 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12210:SF71 - SCP1-LIKE SMALL PHOSPHATASE 4-RELATED Description:  NLI interacting factor-like phosphatase
Genomic Order:  2888 Name:  ? Medtr2g049420
Secondary Identifier:  ? PAC:31066040
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g049420 0.5kb upstream 0.5kb upstream 8643 true chr2: 21781268-21789910 Medicago truncatula
Medtr2g049420 0.5kb upstream 0.5kb upstream 500 false chr2: 21789411-21789910 Medicago truncatula
Medtr2g049420 0.5kb downstream 0.5kb downstream 8643 true chr2: 21780768-21789410 Medicago truncatula
Medtr2g049420 0.5kb downstream 0.5kb downstream 500 false chr2: 21780768-21781267 Medicago truncatula
Medtr2g049420 1.0kb upstream 1.0kb upstream 9143 true chr2: 21781268-21790410 Medicago truncatula
Medtr2g049420 1.0kb upstream 1.0kb upstream 1000 false chr2: 21789411-21790410 Medicago truncatula
Medtr2g049420 1.0kb downstream 1.0kb downstream 9143 true chr2: 21780268-21789410 Medicago truncatula
Medtr2g049420 1.0kb downstream 1.0kb downstream 1000 false chr2: 21780268-21781267 Medicago truncatula
Medtr2g049420 2.0kb upstream 2.0kb upstream 10143 true chr2: 21781268-21791410 Medicago truncatula
Medtr2g049420 2.0kb upstream 2.0kb upstream 2000 false chr2: 21789411-21791410 Medicago truncatula
Medtr2g049420 2.0kb downstream 2.0kb downstream 10143 true chr2: 21779268-21789410 Medicago truncatula
Medtr2g049420 2.0kb downstream 2.0kb downstream 2000 false chr2: 21779268-21781267 Medicago truncatula
Medtr2g049420 5.0kb upstream 5.0kb upstream 13143 true chr2: 21781268-21794410 Medicago truncatula
Medtr2g049420 5.0kb upstream 5.0kb upstream 5000 false chr2: 21789411-21794410 Medicago truncatula
Medtr2g049420 5.0kb downstream 5.0kb downstream 13143 true chr2: 21776268-21789410 Medicago truncatula
Medtr2g049420 5.0kb downstream 5.0kb downstream 5000 false chr2: 21776268-21781267 Medicago truncatula
Medtr2g049420 10.0kb upstream 10.0kb upstream 18143 true chr2: 21781268-21799410 Medicago truncatula
Medtr2g049420 10.0kb upstream 10.0kb upstream 10000 false chr2: 21789411-21799410 Medicago truncatula
Medtr2g049420 10.0kb downstream 10.0kb downstream 18143 true chr2: 21771268-21789410 Medicago truncatula
Medtr2g049420 10.0kb downstream 10.0kb downstream 10000 false chr2: 21771268-21781267 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308135 5265 Fabidae View MSA
124073218 5270 Rosid View MSA
123748033 5271 Pentapetalae View MSA
122786576 5272 Eudicot View MSA
122048249 5273 Angiosperm View MSA
123429149 5275 Viridiplantae View MSA
121310904 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.884       High
cufflinks 3.128        
cufflinks 2.766        
cufflinks 1.132       Low
cufflinks 2.174        
cufflinks 1.188       Low
cufflinks 2.345        
cufflinks 2.865        
cufflinks 1.412        

0 Strain