Gene : Medtr2g049670 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR32227:SF127 - CARBOHYDRATE-BINDING X8 DOMAIN-CONTAINING PROTEIN Description:  carbohydrate-binding X8 domain protein
Genomic Order:  2944 Name:  ? Medtr2g049670
Secondary Identifier:  ? PAC:31062240
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g049670 0.5kb upstream 0.5kb upstream 3414 true chr2: 22304641-22308054 Medicago truncatula
Medtr2g049670 0.5kb upstream 0.5kb upstream 500 false chr2: 22307555-22308054 Medicago truncatula
Medtr2g049670 0.5kb downstream 0.5kb downstream 3414 true chr2: 22304141-22307554 Medicago truncatula
Medtr2g049670 0.5kb downstream 0.5kb downstream 500 false chr2: 22304141-22304640 Medicago truncatula
Medtr2g049670 1.0kb upstream 1.0kb upstream 3914 true chr2: 22304641-22308554 Medicago truncatula
Medtr2g049670 1.0kb upstream 1.0kb upstream 1000 false chr2: 22307555-22308554 Medicago truncatula
Medtr2g049670 1.0kb downstream 1.0kb downstream 3914 true chr2: 22303641-22307554 Medicago truncatula
Medtr2g049670 1.0kb downstream 1.0kb downstream 1000 false chr2: 22303641-22304640 Medicago truncatula
Medtr2g049670 2.0kb upstream 2.0kb upstream 4914 true chr2: 22304641-22309554 Medicago truncatula
Medtr2g049670 2.0kb upstream 2.0kb upstream 2000 false chr2: 22307555-22309554 Medicago truncatula
Medtr2g049670 2.0kb downstream 2.0kb downstream 4914 true chr2: 22302641-22307554 Medicago truncatula
Medtr2g049670 2.0kb downstream 2.0kb downstream 2000 false chr2: 22302641-22304640 Medicago truncatula
Medtr2g049670 5.0kb upstream 5.0kb upstream 7914 true chr2: 22304641-22312554 Medicago truncatula
Medtr2g049670 5.0kb upstream 5.0kb upstream 5000 false chr2: 22307555-22312554 Medicago truncatula
Medtr2g049670 5.0kb downstream 5.0kb downstream 7914 true chr2: 22299641-22307554 Medicago truncatula
Medtr2g049670 5.0kb downstream 5.0kb downstream 5000 false chr2: 22299641-22304640 Medicago truncatula
Medtr2g049670 10.0kb upstream 10.0kb upstream 12914 true chr2: 22304641-22317554 Medicago truncatula
Medtr2g049670 10.0kb upstream 10.0kb upstream 10000 false chr2: 22307555-22317554 Medicago truncatula
Medtr2g049670 10.0kb downstream 10.0kb downstream 12914 true chr2: 22294641-22307554 Medicago truncatula
Medtr2g049670 10.0kb downstream 10.0kb downstream 10000 false chr2: 22294641-22304640 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309743 5265 Fabidae View MSA
124069685 5270 Rosid View MSA
123748729 5271 Pentapetalae View MSA
122795839 5272 Eudicot View MSA
122050272 5273 Angiosperm View MSA
123429175 5275 Viridiplantae View MSA
121349342 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.096       Low
cufflinks 1.238        
cufflinks 1.122        
cufflinks 2.033        
cufflinks 1.319        
cufflinks 0.981        
cufflinks 1.865        
cufflinks 1.212        
cufflinks 3.259       High

0 Strain