Gene : Medtr2g035190 M. truncatula Mt4.0v1
Defline:  (1 of 36) PF00407 - Pathogenesis-related protein Bet v I family (Bet_v_1) Description:  ABA-responsive protein
Genomic Order:  1888 Name:  ? Medtr2g035190
Secondary Identifier:  ? PAC:31063596
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g035190 0.5kb upstream 0.5kb upstream 2107 true chr2: 13529186-13531292 Medicago truncatula
Medtr2g035190 0.5kb upstream 0.5kb upstream 500 false chr2: 13529186-13529685 Medicago truncatula
Medtr2g035190 0.5kb downstream 0.5kb downstream 2107 true chr2: 13529686-13531792 Medicago truncatula
Medtr2g035190 0.5kb downstream 0.5kb downstream 500 false chr2: 13531293-13531792 Medicago truncatula
Medtr2g035190 1.0kb upstream 1.0kb upstream 2607 true chr2: 13528686-13531292 Medicago truncatula
Medtr2g035190 1.0kb upstream 1.0kb upstream 1000 false chr2: 13528686-13529685 Medicago truncatula
Medtr2g035190 1.0kb downstream 1.0kb downstream 2607 true chr2: 13529686-13532292 Medicago truncatula
Medtr2g035190 1.0kb downstream 1.0kb downstream 1000 false chr2: 13531293-13532292 Medicago truncatula
Medtr2g035190 2.0kb upstream 2.0kb upstream 3607 true chr2: 13527686-13531292 Medicago truncatula
Medtr2g035190 2.0kb upstream 2.0kb upstream 2000 false chr2: 13527686-13529685 Medicago truncatula
Medtr2g035190 2.0kb downstream 2.0kb downstream 3607 true chr2: 13529686-13533292 Medicago truncatula
Medtr2g035190 2.0kb downstream 2.0kb downstream 2000 false chr2: 13531293-13533292 Medicago truncatula
Medtr2g035190 5.0kb upstream 5.0kb upstream 6607 true chr2: 13524686-13531292 Medicago truncatula
Medtr2g035190 5.0kb upstream 5.0kb upstream 5000 false chr2: 13524686-13529685 Medicago truncatula
Medtr2g035190 5.0kb downstream 5.0kb downstream 6607 true chr2: 13529686-13536292 Medicago truncatula
Medtr2g035190 5.0kb downstream 5.0kb downstream 5000 false chr2: 13531293-13536292 Medicago truncatula
Medtr2g035190 10.0kb upstream 10.0kb upstream 11607 true chr2: 13519686-13531292 Medicago truncatula
Medtr2g035190 10.0kb upstream 10.0kb upstream 10000 false chr2: 13519686-13529685 Medicago truncatula
Medtr2g035190 10.0kb downstream 10.0kb downstream 11607 true chr2: 13529686-13541292 Medicago truncatula
Medtr2g035190 10.0kb downstream 10.0kb downstream 10000 false chr2: 13531293-13541292 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315508 5265 Fabidae View MSA
124072279 5270 Rosid View MSA
123752390 5271 Pentapetalae View MSA
122797871 5272 Eudicot View MSA
122048225 5273 Angiosperm View MSA
121351454 5274 Embryophyte View MSA
123382173 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 67.07     High  
cufflinks 6.601        
cufflinks 13.889     High  
cufflinks 46.26     High  
cufflinks 4.986       Low
cufflinks 290.502     High High
cufflinks 180.653     High High
cufflinks 5.09       Low
cufflinks 21.227     High  

0 Strain